RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 NME3Q13232 169 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 CA9Q16790 459 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 HADHQ16836 314 aaKnown RBP9.45□□□□□ -0.9
SCARB2-225ENST00000640900 PUS10Q3MIT2 529 aaKnown RBP9.45□□□□□ -0.9
SCARB2-225ENST00000640900 ATP13A4Q4VNC1 1196 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 ZNF569Q5MCW4 686 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 DCAF12L1Q5VU92 463 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 OTOP3Q7RTS5 596 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 PEX26Q7Z412 305 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 ANKS1BQ7Z6G8 1248 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 RHOT1Q8IXI2 618 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 CPXM2Q8N436 756 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 CELF5Q8N6W0 485 aaKnown RBP9.45□□□□□ -0.9
SCARB2-225ENST00000640900 MAFAQ8NHW3 353 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-225ENST00000640900 SH3RF2Q8TEC5 729 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 E2F7Q96AV8 911 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 P2RY11Q96G91 374 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 BTN2A3PQ96KV6 586 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 ALS2CR12Q96Q35 445 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 SNRNP25Q9BV90 132 aaKnown RBP9.45□□□□□ -0.9
SCARB2-225ENST00000640900 TMEM121BQ9BXQ6 578 aaPredicted RBP9.45□□□□□ -0.9
SCARB2-225ENST00000640900 MAGEB5Q9BZ81 275 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 DCLK3Q9C098 648 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 TKTL2Q9H0I9 626 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 TRPC7Q9HCX4 862 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 TMPRSS4Q9NRS4 437 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 ZNF212Q9UDV6 495 aa9.45□□□□□ -0.9
SCARB2-225ENST00000640900 AGO1Q9UL18 857 aaKnown RBP9.45□□□□□ -0.9
SCARB2-225ENST00000640900 DRGXA6NNA5 263 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 TMEM110-MUSTN1A8MSY1 372 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 ESPNB1AK53 854 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 FAM72CH0Y354 149 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 ARNTLO00327 626 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 CES2O00748 559 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 SNPHO15079 494 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 SPOPO43791 374 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 ACSL4O60488 711 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 ECI2O75521 394 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 DESP17661 470 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 CORO1AP31146 461 aaKnown RBP9.44□□□□□ -0.9
SCARB2-225ENST00000640900 HTR7P34969 479 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 AVPR1AP37288 418 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 HARS2P49590 506 aaKnown RBP9.44□□□□□ -0.9
SCARB2-225ENST00000640900 NAP1L1P55209 391 aaKnown RBP9.44□□□□□ -0.9
SCARB2-225ENST00000640900 GNG11P61952 73 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 HTR4Q13639 388 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 DPYSQ14117 519 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 PDK2Q15119 407 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 CLUL1Q15846 466 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 MS4A13Q5J8X5 152 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 ADGRF1Q5T601 910 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 FAM72AQ5TYM5 149 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 TANGO2Q6ICL3 276 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 FAM72DQ6L9T8 149 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 SND1Q7KZF4 910 aaKnown RBP eCLIP9.44□□□□□ -0.95e-6■□□□□ 9.3
SCARB2-225ENST00000640900 GET4Q7L5D6 327 aaPredicted RBP9.44□□□□□ -0.9
SCARB2-225ENST00000640900 FAM72BQ86X60 149 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 ZDHHC14Q8IZN3 488 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 EXD1Q8NHP7 514 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 RAPGEF5Q92565 580 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 ELSPBP1Q96BH3 223 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 OTUB2Q96DC9 234 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 KCTD15Q96SI1 283 aaPredicted RBP9.44□□□□□ -0.9
SCARB2-225ENST00000640900 FAM83CQ9BQN1 747 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 PHF7Q9BWX1 381 aaPredicted RBP9.44□□□□□ -0.9
SCARB2-225ENST00000640900 SMG9Q9H0W8 520 aaKnown RBP9.44□□□□□ -0.9
SCARB2-225ENST00000640900 CARD9Q9H257 536 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 RETREG1Q9H6L5 497 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 PCDH18Q9HCL0 1135 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 SMPD4Q9NXE4 827 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 DDX56Q9NY93 547 aaKnown RBP9.44□□□□□ -0.9
SCARB2-225ENST00000640900 CFAP97Q9P2B7 532 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 RCOR3Q9P2K3 495 aaPredicted RBP9.44□□□□□ -0.9
SCARB2-225ENST00000640900 PPARGC1AQ9UBK2 798 aaKnown RBP9.44□□□□□ -0.9
SCARB2-225ENST00000640900 PCSK1NQ9UHG2 260 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 TTC7AQ9ULT0 858 aaPredicted RBP9.44□□□□□ -0.9
SCARB2-225ENST00000640900 AP4E1Q9UPM8 1137 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 EFR3BQ9Y2G0 817 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 ZNF510Q9Y2H8 683 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 HS3ST4Q9Y661 456 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 DOCK4Q8N1I0 1966 aa9.44□□□□□ -0.9
SCARB2-225ENST00000640900 WASH4PA8MWX3 477 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 LOC730098B7Z3J9 87 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 KIF2AO00139 706 aaPredicted RBP9.43□□□□□ -0.9
SCARB2-225ENST00000640900 APOEP02649 317 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 ATP1A1P05023 1023 aaKnown RBP9.43□□□□□ -0.9
SCARB2-225ENST00000640900 KDELR1P24390 212 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 MSNP26038 577 aaKnown RBP9.43□□□□□ -0.9
SCARB2-225ENST00000640900 SLC6A4P31645 630 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 VIPR2P41587 438 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 CDKN2BP42772 138 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 COPS2P61201 443 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 AUHQ13825 339 aaKnown RBP9.43□□□□□ -0.9
SCARB2-225ENST00000640900 DPYSL3Q14195 570 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 RPS6KA1Q15418 735 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 PPP2R5EQ16537 467 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 ARL13BQ3SXY8 428 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 KCNT1Q5JUK3 1230 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 SCYL2Q6P3W7 929 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 VITQ6UXI7 678 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms