RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 HAPLN3Q96S86 360 aa9.08□□□□□ -0.96
HLA-B-258ENST00000640615 OSBPL8Q9BZF1 889 aa9.08□□□□□ -0.96
HLA-B-258ENST00000640615 SMG9Q9H0W8 520 aaKnown RBP9.08□□□□□ -0.96
HLA-B-258ENST00000640615 OSBPL2Q9H1P3 480 aa9.08□□□□□ -0.96
HLA-B-258ENST00000640615 ADAM7Q9H2U9 754 aa9.08□□□□□ -0.96
HLA-B-258ENST00000640615 RNF14Q9UBS8 474 aa9.08□□□□□ -0.96
HLA-B-258ENST00000640615 XPO7Q9UIA9 1087 aaKnown RBP9.08□□□□□ -0.96
HLA-B-258ENST00000640615 CDH22Q9UJ99 828 aa9.08□□□□□ -0.96
HLA-B-258ENST00000640615 CLUHO75153 1309 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 MYO16Q9Y6X6 1858 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 hCG_1818297A0A087WSY0 165 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 GOLGA6L7A0A1B0GV03 622 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 SOBPA7XYQ1 873 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 FAM72CH0Y354 149 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 PGRMC1O00264 195 aaKnown RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 PDE2AO00408 941 aaPredicted RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 EEF2KO00418 725 aaKnown RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 TBX10O75333 385 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 STC2O76061 302 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 TJP3O95049 919 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 KLKB1P03952 638 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 GOT1P17174 413 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 IL4RP24394 825 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 CORO1AP31146 461 aaKnown RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 GGCXP38435 758 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 ITIH3Q06033 890 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 CKAP4Q07065 602 aaKnown RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 MTA1Q13330 715 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 CCDC85BQ15834 202 aaPredicted RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 CLUL1Q15846 466 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 PPP2R5EQ16537 467 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 CTC1Q2NKJ3 1217 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 ANKRD20A8PQ5CZ79 823 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 FAM72AQ5TYM5 149 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 RAP1GAP2Q684P5 730 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 FAM72DQ6L9T8 149 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 RWDD4Q6NW29 188 aaKnown RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 GET4Q7L5D6 327 aaPredicted RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 FAM72BQ86X60 149 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 FAM71BQ8TC56 605 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 ACTRT1Q8TDG2 376 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 ADAMTS19Q8TE59 1207 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 WBP2Q969T9 261 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 PABPC5Q96DU9 382 aaKnown RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 ZFRQ96KR1 1074 aaKnown RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 C1orf74Q96LT6 269 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 NAP1L3Q99457 506 aaPredicted RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 EPAS1Q99814 870 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 ZNF670Q9BS34 389 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 DCLK3Q9C098 648 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 S1PR5Q9H228 398 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 CWC15Q9P013 229 aaKnown RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 STIM2Q9P246 746 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 CFAP97Q9P2B7 532 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 OR12D3Q9UGF7 316 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 ZMYM5Q9UJ78 669 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 LSM7Q9UK45 103 aaKnown RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 TTC7AQ9ULT0 858 aaPredicted RBP9.07□□□□□ -0.96
HLA-B-258ENST00000640615 ARHGAP26Q9UNA1 814 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 SH3BP1Q9Y3L3 701 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 HS3ST4Q9Y661 456 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 MYO9BQ13459 2157 aa9.07□□□□□ -0.96
HLA-B-258ENST00000640615 NCOR1O75376 2440 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 GREB1Q4ZG55 1949 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 TCRBV7S2A1N4TA0A589 114 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 LEFTY2O00292 366 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 KRIT1O00522 736 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 SCAMP3O14828 347 aaKnown RBP9.06□□□□□ -0.96
HLA-B-258ENST00000640615 ACSL4O60488 711 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 CST8O60676 142 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 LRIG2O94898 1065 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 COL9A1P20849 921 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 AMPD1P23109 780 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 PTPN7P35236 360 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 LTBRP36941 435 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 ZNF135P52742 658 aaPredicted RBP9.06□□□□□ -0.96
HLA-B-258ENST00000640615 MLLT6P55198 1093 aaPredicted RBP9.06□□□□□ -0.96
HLA-B-258ENST00000640615 TPI1P60174 286 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 DYNLT1P63172 113 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 ZXDBP98169 803 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 AUHQ13825 339 aaKnown RBP9.06□□□□□ -0.96
HLA-B-258ENST00000640615 TFDP2Q14188 446 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 SKIV2LQ15477 1246 aaKnown RBP9.06□□□□□ -0.96
HLA-B-258ENST00000640615 TAZQ16635 292 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 MS4A13Q5J8X5 152 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 ACBD5Q5T8D3 534 aaPredicted RBP9.06□□□□□ -0.96
HLA-B-258ENST00000640615 PIK3R6Q5UE93 754 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 LRRC31Q6UY01 552 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 RFX8Q6ZV50 586 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 C14orf80Q86SX3 495 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 CHSY1Q86X52 802 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 DDX42Q86XP3 938 aaKnown RBP eCLIP9.06□□□□□ -0.96
HLA-B-258ENST00000640615 ARID3BQ8IVW6 561 aaPredicted RBP9.06□□□□□ -0.96
HLA-B-258ENST00000640615 NPAS3Q8IXF0 933 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 CEP112Q8N8E3 955 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 MNS1Q8NEH6 495 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 ZSCAN18Q8TBC5 510 aaPredicted RBP9.06□□□□□ -0.96
HLA-B-258ENST00000640615 SH3RF2Q8TEC5 729 aa9.06□□□□□ -0.96
HLA-B-258ENST00000640615 MAIP1Q8WWC4 291 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms