RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 HS1BP3Q53T59 392 aa22.34■■□□□ 1.17
TSPAN9-208ENST00000640568 MS4A13Q5J8X5 152 aa22.34■■□□□ 1.17
TSPAN9-208ENST00000640568 ERMARDQ5T6L9 678 aa22.34■■□□□ 1.17
TSPAN9-208ENST00000640568 CPXM2Q8N436 756 aa22.34■■□□□ 1.17
TSPAN9-208ENST00000640568 CSGALNACT1Q8TDX6 532 aa22.34■■□□□ 1.17
TSPAN9-208ENST00000640568 LINC00597Q9H2U6 94 aa22.34■■□□□ 1.17
TSPAN9-208ENST00000640568 EBF3Q9H4W6 596 aa22.34■■□□□ 1.17
TSPAN9-208ENST00000640568 TMPRSS4Q9NRS4 437 aa22.34■■□□□ 1.17
TSPAN9-208ENST00000640568 STOML2Q9UJZ1 356 aa22.34■■□□□ 1.17
TSPAN9-208ENST00000640568 FZD10Q9ULW2 581 aa22.34■■□□□ 1.17
TSPAN9-208ENST00000640568 AP4E1Q9UPM8 1137 aa22.34■■□□□ 1.17
TSPAN9-208ENST00000640568 HYOU1Q9Y4L1 999 aa22.34■■□□□ 1.17
TSPAN9-208ENST00000640568 HS3ST4Q9Y661 456 aa22.34■■□□□ 1.17
TSPAN9-208ENST00000640568 GOLGA6L7A0A1B0GV03 622 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 PALMO75781 387 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 CYBBP04839 570 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 TNNT1P13805 278 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 TACR2P21452 398 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 SCAPQ12770 1279 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 SMTNL2Q2TAL5 461 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 BOLA3Q53S33 107 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 PIK3R6Q5UE93 754 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 TPGS1Q6ZTW0 290 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 CPA6Q8N4T0 437 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 ASIC4Q96FT7 647 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 PEBP4Q96S96 227 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 FAM83CQ9BQN1 747 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 SNRNP25Q9BV90 132 aaKnown RBP22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 GOLPH3Q9H4A6 298 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 ANLNQ9NQW6 1124 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 CAPN6Q9Y6Q1 641 aa22.33■■□□□ 1.16
TSPAN9-208ENST00000640568 GRID2IPA4D2P6 1211 aa22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 KRT7P08729 469 aa22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 GGCXP38435 758 aa22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 VCPP55072 806 aaKnown RBP22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 SLC25A11Q02978 314 aaKnown RBP22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 NR1H3Q13133 447 aa22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 ODF2Q5BJF6 829 aa22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 FAM133BQ5BKY9 247 aaKnown RBP22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 KCNT1Q5JUK3 1230 aa22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 NADSYN1Q6IA69 706 aa22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 LRRC31Q6UY01 552 aa22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 CPNE8Q86YQ8 564 aa22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 REXO1L1PQ8IX06 675 aa22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 GJD3Q8N144 294 aa22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 HSPH1Q92598 858 aa22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 DHX35Q9H5Z1 703 aaKnown RBP22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 SPHK2Q9NRA0 654 aa22.32■■□□□ 1.16
TSPAN9-208ENST00000640568 TRDMT1O14717 391 aaKnown RBP22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 TSPAN3O60637 253 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 ADH1CP00326 375 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 ARSAP15289 507 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 TCF4P15884 667 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 IL1R2P27930 398 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 RUNX3Q13761 415 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 ANO4Q32M45 955 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 RFWD3Q6PCD5 774 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 RNF135Q8IUD6 432 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 PSTKQ8IV42 348 aaKnown RBP22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 RHOT1Q8IXI2 618 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 FAM217AQ8IXS0 508 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 ADGRG2Q8IZP9 1017 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 LGI2Q8N0V4 545 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 CCAR2Q8N163 923 aaKnown RBP22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 TEKT4Q8WW24 435 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 C1orf74Q96LT6 269 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 OSBPL2Q9H1P3 480 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 GPATCH2LQ9NWQ4 482 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 AMFRQ9UKV5 643 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 VANGL2Q9ULK5 521 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 SORCS3Q9UPU3 1222 aa22.31■■□□□ 1.16
TSPAN9-208ENST00000640568 I6L893 689 aaPredicted RBP22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 SLC6A4P31645 630 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 MLLT6P55198 1093 aaPredicted RBP22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 TAS2R40P59535 323 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 PFKPQ01813 784 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 TNK2Q07912 1038 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 AUHQ13825 339 aaKnown RBP22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 DHCR24Q15392 516 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 MPPE1Q53F39 396 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 RABGAP1LQ5R372 815 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 PEX26Q7Z412 305 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 DDI1Q8WTU0 396 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 RPRD1AQ96P16 312 aaPredicted RBP22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 EPAS1Q99814 870 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 ECT2Q9H8V3 914 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 HPS4Q9NQG7 708 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 OR12D3Q9UGF7 316 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 SNX10Q9Y5X0 201 aa22.3■■□□□ 1.16
TSPAN9-208ENST00000640568 DOCK4Q8N1I0 1966 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 SRGAP2O75044 1071 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 RARAP10276 462 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 SRFP11831 508 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 GAD2Q05329 585 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 KRT81Q14533 505 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 LY6G5CQ5SRR4 150 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 POLNQ7Z5Q5 900 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 LRRC57Q8N9N7 239 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 HJURPQ8NCD3 748 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms