RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 LVRNQ6Q4G3 990 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.3□□□□□ -0.6
SCN1B-208ENST00000640135 MCOLN3Q8TDD5 553 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 HNRNPLLQ8WVV9 542 aaKnown RBP11.3□□□□□ -0.6
SCN1B-208ENST00000640135 UPF1Q92900 1129 aaKnown RBP eCLIP11.3□□□□□ -0.6
SCN1B-208ENST00000640135 TAS2R13Q9NYV9 303 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 BTBD7Q9P203 1132 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 CTNNAL1Q9UBT7 734 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 ADGRA2Q96PE1 1338 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 DDHD2O94830 711 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 KRT6AP02538 564 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 KRT6BP04259 564 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 KRT6CP48668 564 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 SULT2A1Q06520 285 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 LRRC74AQ0VAA2 488 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 ITGB3BPQ13352 177 aaPredicted RBP11.3□□□□□ -0.6
SCN1B-208ENST00000640135 SPANXN3Q5MJ09 141 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 TMEM121Q9BTD3 319 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 OSGEPQ9NPF4 335 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 FBXO10Q9UK96 956 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 NFKBIEO00221 500 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 ADH1CP00326 375 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 MPOP05164 745 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 EPB42P16452 691 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 ARF4P18085 180 aaPredicted RBP11.3□□□□□ -0.6
SCN1B-208ENST00000640135 ZNF143P52747 638 aaPredicted RBP11.3□□□□□ -0.6
SCN1B-208ENST00000640135 BRMS1LQ5PSV4 323 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 STRA8Q7Z7C7 330 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 PIGZQ86VD9 579 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 KATNAL2Q8IYT4 538 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 CELF6Q96J87 481 aaKnown RBP11.3□□□□□ -0.6
SCN1B-208ENST00000640135 MCCC1Q96RQ3 725 aaPredicted RBP11.3□□□□□ -0.6
SCN1B-208ENST00000640135 TLE6Q9H808 572 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 Q9Y3F1 56 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 MON2Q7Z3U7 1717 aa11.3□□□□□ -0.6
SCN1B-208ENST00000640135 SYNDIG1LA6NDD5 238 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 ZSCAN9O15535 394 aaPredicted RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 HSPA1AP0DMV8 641 aaKnown RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 HSPA1BP0DMV9 641 aaKnown RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 CRABP2P29373 138 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 PGM1P36871 562 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 CSE1LP55060 971 aaKnown RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 PPP3CAQ08209 521 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 HSDL1Q3SXM5 330 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 SH3D19Q5HYK7 790 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 OTOAQ7RTW8 1153 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 REXO1L1PQ8IX06 675 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 PIP4K2CQ8TBX8 421 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 ATG4AQ8WYN0 398 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 ARL8AQ96BM9 186 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 CEP19Q96LK0 163 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 PRMT1Q99873 361 aaKnown RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 OMDQ99983 421 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 PACSIN1Q9BY11 444 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 ZYG11BQ9C0D3 744 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 OR12D3Q9UGF7 316 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 TUBGCP4Q9UGJ1 667 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 CDV3Q9UKY7 258 aaKnown RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 A0A088AWK7 358 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 ZNF10P21506 573 aaPredicted RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 GP5P40197 560 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 ALDH18A1P54886 795 aaKnown RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 GRM3Q14832 879 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 ACOX1Q15067 660 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 SETMARQ53H47 684 aaPredicted RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 SGO1Q5FBB7 561 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 MYLPFQ96A32 169 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 REPS1Q96D71 796 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 MAN1C1Q9NR34 630 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 TMEM161AQ9NX61 479 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 DTNAQ9Y4J8 743 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 SHPRHQ149N8 1683 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 KPNA5O15131 536 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 RAD51BO15315 384 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 CYP1A1P04798 512 aaPredicted RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 AMPD1P23109 780 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 HNRNPH2P55795 449 aaKnown RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 PARP6Q2NL67 630 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 CBWD6Q4V339 395 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 CBWD3Q5JTY5 395 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 CBWD5Q5RIA9 395 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 ATAT1Q5SQI0 421 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 ANKS6Q68DC2 871 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 TSHZ1Q6ZSZ6 1077 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 FAM43BQ6ZT52 329 aaPredicted RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 TRMT11Q7Z4G4 463 aaKnown RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 AGGF1Q8N302 714 aaeCLIP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 TADA1Q96BN2 335 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 EPN3Q9H201 632 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 RUVBL2Q9Y230 463 aaKnown RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 CAPN6Q9Y6Q1 641 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 ATRNL1Q5VV63 1379 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 PSMD12O00232 456 aaPredicted RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 XPO1O14980 1071 aaKnown RBP11.29□□□□□ -0.6
SCN1B-208ENST00000640135 NDUFS2O75306 463 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 EOMESO95936 686 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 SPATA31C1P0DKV0 1188 aa11.29□□□□□ -0.6
SCN1B-208ENST00000640135 PGAM1P18669 254 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms