RNA–Protein interactions for RNA: ENST00000639850.1

ME2-216, Transcript of malic enzyme 2, human

TSL 5 BASIC

Gene ME2, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ME2-216	ENST00000639850	SMG5	Q9UPR3	1016 aa	Known RBP	21.18	■□□□□ 0.98
ME2-216	ENST00000639850	ATXN2	Q99700	1313 aa	Known RBP	21.18	■□□□□ 0.98
ME2-216	ENST00000639850	ARVCF	O00192	962 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	PRPF4	O43172	522 aa	Known RBP eCLIP	21.18	■□□□□ 0.98
ME2-216	ENST00000639850	FDFT1	P37268	417 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	GRIK1	P39086	918 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	OR1G1	P47890	313 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	HCAR3	P49019	387 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	COLGALT2	Q8IYK4	626 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	SLAIN1	Q8ND83	568 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	DCAKD	Q8WVC6	231 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	LRRC39	Q96DD0	335 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	TRIM62	Q9BVG3	475 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	TKTL2	Q9H0I9	626 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	TBC1D13	Q9NVG8	400 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	KANSL3	Q9P2N6	904 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	IKBKG	Q9Y6K9	419 aa		21.18	■□□□□ 0.98
ME2-216	ENST00000639850	TCP11X1	B4DZS4	312 aa		21.17	■□□□□ 0.98
ME2-216	ENST00000639850	RNF103	O00237	685 aa		21.17	■□□□□ 0.98
ME2-216	ENST00000639850	IFRD2	Q12894	506 aa	Predicted RBP	21.17	■□□□□ 0.98
ME2-216	ENST00000639850	KBTBD12	Q3ZCT8	623 aa		21.17	■□□□□ 0.98
ME2-216	ENST00000639850	C6orf89	Q6UWU4	347 aa		21.17	■□□□□ 0.98
ME2-216	ENST00000639850	TAC4	Q86UU9	113 aa		21.17	■□□□□ 0.98
ME2-216	ENST00000639850	COLGALT1	Q8NBJ5	622 aa		21.17	■□□□□ 0.98
ME2-216	ENST00000639850	RNF34	Q969K3	372 aa		21.17	■□□□□ 0.98
ME2-216	ENST00000639850	FAM193B	Q96PV7	902 aa	Predicted RBP	21.17	■□□□□ 0.98
ME2-216	ENST00000639850	FTHL17	Q9BXU8	183 aa		21.17	■□□□□ 0.98
ME2-216	ENST00000639850	SEPT10	Q9P0V9	454 aa		21.17	■□□□□ 0.98
ME2-216	ENST00000639850	SARNP	P82979	210 aa	Known RBP	21.17	■□□□□ 0.98
ME2-216	ENST00000639850	XAB2	Q9HCS7	855 aa	Known RBP	21.17	■□□□□ 0.98
ME2-216	ENST00000639850	SAMD15	Q9P1V8	674 aa		21.17	■□□□□ 0.98
ME2-216	ENST00000639850	OPHN1	O60890	802 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	CP	P00450	1065 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	OR4Q2	P0C623	313 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	KRT4	P19013	534 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	MAGEA3	P43357	314 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	SLC18A1	P54219	525 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	SLC39A12	Q504Y0	691 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	ZNF534	Q76KX8	674 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	LRRC8D	Q7L1W4	858 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	PIGW	Q7Z7B1	504 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	DQX1	Q8TE96	717 aa	Known RBP	21.16	■□□□□ 0.98
ME2-216	ENST00000639850	NUP205	Q92621	2012 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	EPAS1	Q99814	870 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	PAIP2	Q9BPZ3	127 aa	Known RBP	21.16	■□□□□ 0.98
ME2-216	ENST00000639850	OR12D3	Q9UGF7	316 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	PRG3	Q9Y2Y8	225 aa	Predicted RBP	21.16	■□□□□ 0.98
ME2-216	ENST00000639850	TTC3	P53804	2025 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850		F5H423	210 aa	Predicted RBP	21.16	■□□□□ 0.98
ME2-216	ENST00000639850	TMEM189-UBE2V1	I3L0A0	370 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	CA4	P22748	312 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	GRK4	P32298	578 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	GBP2	P32456	591 aa	Predicted RBP	21.16	■□□□□ 0.98
ME2-216	ENST00000639850	SLC5A3	P53794	718 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	IL9R	Q01113	521 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	YTHDF3	Q7Z739	585 aa	Known RBP	21.16	■□□□□ 0.98
ME2-216	ENST00000639850	TP53INP2	Q8IXH6	220 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	OTUD6B	Q8N6M0	293 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	CCDC197	Q8NCU1	140 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	MAGEB18	Q96M61	343 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	ELAC2	Q9BQ52	826 aa	Known RBP	21.16	■□□□□ 0.98
ME2-216	ENST00000639850	DNAJB4	Q9UDY4	337 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	RAD54B	Q9Y620	910 aa		21.16	■□□□□ 0.98
ME2-216	ENST00000639850	COL4A4	P53420	1690 aa	Predicted RBP	21.16	■□□□□ 0.98
ME2-216	ENST00000639850	INHBA	P08476	426 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	SELP	P16109	830 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	ZNF135	P52742	658 aa	Predicted RBP	21.15	■□□□□ 0.98
ME2-216	ENST00000639850	WDR4	P57081	412 aa	Known RBP	21.15	■□□□□ 0.98
ME2-216	ENST00000639850	NUGGC	Q68CJ6	796 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	SLC44A1	Q8WWI5	657 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	SIGLEC10	Q96LC7	697 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	TGS1	Q96RS0	853 aa	Known RBP	21.15	■□□□□ 0.98
ME2-216	ENST00000639850	CEP41	Q9BYV8	373 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	MAD1L1	Q9Y6D9	718 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	OAZ2	O95190	189 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	RPA3	P35244	121 aa	Predicted RBP	21.15	■□□□□ 0.98
ME2-216	ENST00000639850	GRIA1	P42261	906 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	CDK16	Q00536	496 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	RNF187	Q5TA31	235 aa	Predicted RBP	21.15	■□□□□ 0.98
ME2-216	ENST00000639850	BEND5	Q7L4P6	421 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	ANKS4B	Q8N8V4	417 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	DENND1A	Q8TEH3	1009 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	ABCC13	Q9NSE7	274 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	TMEM161A	Q9NX61	479 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	PHF24	Q9UPV7	400 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	TTLL3	Q9Y4R7	772 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	SNX10	Q9Y5X0	201 aa		21.15	■□□□□ 0.98
ME2-216	ENST00000639850	MYO16	Q9Y6X6	1858 aa		21.14	■□□□□ 0.98
ME2-216	ENST00000639850	IQANK1	A0A1B0GTG1	560 aa		21.14	■□□□□ 0.97
ME2-216	ENST00000639850	TRDMT1	O14717	391 aa	Known RBP	21.14	■□□□□ 0.97
ME2-216	ENST00000639850	NCAM2	O15394	837 aa		21.14	■□□□□ 0.97
ME2-216	ENST00000639850	TYROBP	O43914	113 aa		21.14	■□□□□ 0.97
ME2-216	ENST00000639850	TADA2A	O75478	443 aa		21.14	■□□□□ 0.97
ME2-216	ENST00000639850	WASHC5	Q12768	1159 aa		21.14	■□□□□ 0.97
ME2-216	ENST00000639850	BTBD8	Q5XKL5	378 aa		21.14	■□□□□ 0.97
ME2-216	ENST00000639850	PRPF39	Q86UA1	669 aa	Known RBP	21.14	■□□□□ 0.97
ME2-216	ENST00000639850	SCN4B	Q8IWT1	228 aa		21.14	■□□□□ 0.97
ME2-216	ENST00000639850	MZB1	Q8WU39	189 aa		21.14	■□□□□ 0.97
ME2-216	ENST00000639850	EBNA1BP2	Q99848	306 aa	Known RBP	21.14	■□□□□ 0.97
ME2-216	ENST00000639850	SSU72	Q9NP77	194 aa	Known RBP	21.14	■□□□□ 0.97

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms