RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 GPR17Q13304 367 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 PAFAH1B3Q15102 231 aaKnown RBP22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 BBS9Q3SYG4 887 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 CCNYQ8ND76 341 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 GIPC2Q8TF65 315 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 HTR3CQ8WXA8 447 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 PRDM12Q9H4Q4 367 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 VPS37BQ9H9H4 285 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 KIAA0100Q14667 2235 aaKnown RBP22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 PIAS1O75925 651 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 APRTP07741 180 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 EPHB2P29323 1055 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 ELAVL2Q12926 359 aaKnown RBP22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 SPOUT1Q5T280 376 aaKnown RBP22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 DENND5BQ6ZUT9 1274 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 TMEM109Q9BVC6 243 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 CLUHO75153 1309 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 WDR27A2RRH5 827 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 ALOX15BO15296 676 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 TBX18O95935 607 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 ANKS3Q6ZW76 656 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 ZNF771Q7L3S4 317 aaPredicted RBP22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 PGM2Q96G03 612 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 P2RY11Q96G91 374 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 EPAS1Q99814 870 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 TRIM62Q9BVG3 475 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 CAPS2Q9BXY5 557 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 RABEP2Q9H5N1 569 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 ARHGEF38Q9NXL2 777 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 PSD3Q9NYI0 1048 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 NEU3Q9UQ49 428 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 GPX6P59796 221 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 PRKD1Q15139 912 aaPredicted RBP22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 BEND5Q7L4P6 421 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 IGDCC3Q8IVU1 814 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 AGGF1Q8N302 714 aaeCLIP22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 FBXO36Q8NEA4 188 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 FBXO22Q8NEZ5 403 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 FBXO32Q969P5 355 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 ARMC5Q96C12 935 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 IGSF21Q96ID5 467 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 TBK1Q9UHD2 729 aa22.34■■□□□ 1.17
CHRNA7-228ENST00000637519 ERICH4A6NGS2 130 aa22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 KCNK1O00180 336 aa22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 PAGE1O75459 146 aa22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 SSTR1P30872 391 aa22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 GNGT1P63211 74 aa22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 SKOR1P84550 965 aa22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 C6orf118Q5T5N4 469 aa22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 RWDD4Q6NW29 188 aaKnown RBP22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 MON1AQ86VX9 555 aa22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 MRRFQ96E11 262 aaKnown RBP22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 CELF6Q96J87 481 aaKnown RBP22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 KLC2Q9H0B6 622 aa22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 FBXO44Q9H4M3 255 aa22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 CHMP2BQ9UQN3 213 aa22.33■■□□□ 1.17
CHRNA7-228ENST00000637519 PLXNA3P51805 1871 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 H7C4K7 107 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 RNF103O00237 685 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 NDC80O14777 642 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 CHADO15335 359 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 GCATO75600 419 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 HAPLN1P10915 354 aaPredicted RBP22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 ATF6P18850 670 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 TAF10Q12962 218 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 EFTUD2Q15029 972 aaKnown RBP eCLIP22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 PSMD5Q16401 504 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 SPPL2BQ8TCT7 592 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 TOP1MTQ969P6 601 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 SERPINB12Q96P63 405 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 MAGED2Q9UNF1 606 aaPredicted RBP22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 EFEMP2O95967 443 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 HSPA8P11142 646 aaKnown RBP22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 YWHAQP27348 245 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 CCR1P32246 355 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 OR1D2P34982 312 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 EFEMP1Q12805 493 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 ANKRD20A2Q5SQ80 823 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 ANKRD20A1Q5TYW2 823 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 RASIP1Q5U651 963 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 ANKRD20A3Q5VUR7 823 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 ARHGEF18Q6ZSZ5 1173 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 CEP128Q6ZU80 1094 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 CYP4X1Q8N118 509 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 PDIK1LQ8N165 341 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 VPS52Q8N1B4 723 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 PYROXD1Q8WU10 500 aa22.32■■□□□ 1.16
CHRNA7-228ENST00000637519 A0A0A0MRY4 1105 aa22.31■■□□□ 1.16
CHRNA7-228ENST00000637519 C5orf60A6NFR6 353 aa22.31■■□□□ 1.16
CHRNA7-228ENST00000637519 HACD1B0YJ81 288 aa22.31■■□□□ 1.16
CHRNA7-228ENST00000637519 E7ESA3 106 aa22.31■■□□□ 1.16
CHRNA7-228ENST00000637519 PPP2R2AP63151 447 aa22.31■■□□□ 1.16
CHRNA7-228ENST00000637519 PDK1Q15118 436 aa22.31■■□□□ 1.16
CHRNA7-228ENST00000637519 USP41Q3LFD5 358 aa22.31■■□□□ 1.16
CHRNA7-228ENST00000637519 MDM1Q8TC05 714 aa22.31■■□□□ 1.16
CHRNA7-228ENST00000637519 SPATA13Q96N96 652 aa22.31■■□□□ 1.16
CHRNA7-228ENST00000637519 MTRRQ9UBK8 725 aa22.31■■□□□ 1.16
CHRNA7-228ENST00000637519 SHOX2O60902 331 aaPredicted RBP22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 ABHD2P08910 425 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 ELK3P41970 407 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms