RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MYL4P12829 197 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 PDGFRAP16234 1089 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 RDXP35241 583 aaKnown RBP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 NRG1Q02297 640 aaPredicted RBP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 SCAPQ12770 1279 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 IFRD2Q12894 506 aaPredicted RBP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 EIF4EBP2Q13542 120 aaPredicted RBP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 MTMR3Q13615 1198 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 MTF1Q14872 753 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 TRIP4Q15650 581 aaPredicted RBP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 SLC5A9Q2M3M2 681 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 ARL13BQ3SXY8 428 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 ARHGAP29Q52LW3 1261 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 DCAF6Q58WW2 860 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 C10orf120Q5SQS8 335 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 LRRC38Q5VT99 294 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 SDHAF4Q5VUM1 108 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 POLNQ7Z5Q5 900 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 ZDHHC14Q8IZN3 488 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 CMTM8Q8IZV2 173 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 CELF5Q8N6W0 485 aaKnown RBP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 TDRD5Q8NAT2 981 aaKnown RBP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 DQX1Q8TE96 717 aaKnown RBP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 ATXN2LQ8WWM7 1075 aaKnown RBP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 MCEEQ96PE7 176 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 ALS2CR12Q96Q35 445 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 DDX50Q9BQ39 737 aaKnown RBP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 NUP85Q9BW27 656 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 NACA2Q9H009 215 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 PRDM16Q9HAZ2 1276 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 NMUR1Q9HB89 426 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 TIMMDC1Q9NPL8 285 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 TDP1Q9NUW8 608 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 DONSONQ9NYP3 566 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 MARCH2Q9P0N8 246 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 CTTNBP2NLQ9P2B4 639 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 TBC1D14Q9P2M4 693 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 TJP2Q9UDY2 1190 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 SLC12A6Q9UHW9 1150 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 STOML2Q9UJZ1 356 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 LSM7Q9UK45 103 aaKnown RBP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 REXO2Q9Y3B8 237 aaKnown RBP6.99□□□□□ -1.29
UPF3B-205ENST00000636792 KIAA1549LQ6ZVL6 1849 aa6.99□□□□□ -1.29
UPF3B-205ENST00000636792 MIF4GDA9UHW6 222 aaKnown RBP6.98□□□□□ -1.29
UPF3B-205ENST00000636792 SHISA8B8ZZ34 492 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 GOLGA8SH3BPF8 625 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 PSTPIP1O43586 416 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 MOSPD3O75425 235 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 ECI2O75521 394 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 PROSCO94903 275 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 TRUB2O95900 331 aaKnown RBP6.98□□□□□ -1.29
UPF3B-205ENST00000636792 FYNP06241 537 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 HDCP19113 662 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 KCNA5P22460 613 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 PSMA2P25787 234 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 COL8A1P27658 744 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 CCR1P32246 355 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 RFC1P35251 1148 aaPredicted RBP6.98□□□□□ -1.29
UPF3B-205ENST00000636792 CHKAP35790 457 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 FLT3P36888 993 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 CCR2P41597 374 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 HARS2P49590 506 aaKnown RBP6.98□□□□□ -1.29
UPF3B-205ENST00000636792 SULT1E1P49888 294 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 DEUP1Q05D60 604 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 DLX2Q07687 328 aaPredicted RBP6.98□□□□□ -1.29
UPF3B-205ENST00000636792 SKIV2LQ15477 1246 aaKnown RBP6.98□□□□□ -1.29
UPF3B-205ENST00000636792 TEAD2Q15562 447 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 HADHQ16836 314 aaKnown RBP6.98□□□□□ -1.29
UPF3B-205ENST00000636792 GPR158Q5T848 1215 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 TTC39BQ5VTQ0 682 aaPredicted RBP6.98□□□□□ -1.29
UPF3B-205ENST00000636792 C1orf228Q6PIY5 440 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 FAM217AQ8IXS0 508 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 DEFB106AQ8N104 65 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 CPXM2Q8N436 756 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 ATP6V0D2Q8N8Y2 350 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 ACRBPQ8NEB7 543 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 SLC35G2Q8TBE7 412 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 GPR152Q8TDT2 470 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 CLEC4CQ8WTT0 213 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 TEKT4Q8WW24 435 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 RXFP2Q8WXD0 754 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 FGF13Q92913 245 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 SMARCD2Q92925 531 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 ELSPBP1Q96BH3 223 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 MSANTD3Q96H12 275 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 SLC39A13Q96H72 371 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 PIWIL1Q96J94 861 aaKnown RBP6.98□□□□□ -1.29
UPF3B-205ENST00000636792 BTN2A3PQ96KV6 586 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 ASB16Q96NS5 453 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 PACSIN1Q9BY11 444 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 KCNF1Q9H3M0 494 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 POMKQ9H5K3 350 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 SLITRK6Q9H5Y7 841 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 FAM204AQ9H8W3 233 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 ZFP14Q9HCL3 533 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 HCFC1R1Q9NWW0 138 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 DDIT4Q9NX09 232 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 OSER1Q9NX31 292 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 IGSF9Q9P2J2 1179 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms