RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 AGAP2Q99490 1192 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 GPRC5DQ9NZD1 345 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 SIRPGQ9P1W8 387 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 RPS6KL1Q9Y6S9 549 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 FZD9O00144 591 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 TSPAN1O60635 241 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 DNAJC6O75061 913 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 DGKIO75912 1065 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 ANPEPP15144 967 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 CACNA2D1P54289 1103 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 STILQ15468 1287 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 SLC9A4Q6AI14 798 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 PHTF2Q8N3S3 785 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 HTR3CQ8WXA8 447 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 OSMRQ99650 979 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 MTMR10Q9NXD2 777 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 EMCNQ9ULC0 261 aa14.45□□□□□ -0.1
CACNA1A-228ENST00000636610 BCLAF3A2AJT9 711 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 RNF103O00237 685 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 DCXO43602 365 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 LMNAP02545 664 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 ACADSP16219 412 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 TTLL4Q14679 1199 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 CFAP157Q5JU67 520 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 FAM219BQ5XKK7 198 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 RAPH1Q70E73 1250 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 PID1Q7Z2X4 250 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 KDELC2Q7Z4H8 507 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 DEFB106AQ8N104 65 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 PLD6Q8N2A8 252 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 NLGN2Q8NFZ4 835 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 OR52K1Q8NGK4 314 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 SLC35F5Q8WV83 523 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 TSC22D3Q99576 134 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 CYP3A43Q9HB55 503 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 BPTFQ12830 3046 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 NUP205Q92621 2012 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 TXNDC9O14530 226 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 SPAG6O75602 509 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 MCF2P10911 925 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 TGM2P21980 687 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 SERPINB6P35237 376 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 GLRBP48167 497 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 KRT72Q14CN4 511 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 NCBP2-AS2Q69YL0 99 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 ARMCX2Q7L311 632 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 RASSF3Q86WH2 238 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 CDKL3Q8IVW4 592 aaPredicted RBP14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 SPATA6LQ8N4H0 392 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 DNAAF3Q8N9W5 541 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 TFB1MQ8WVM0 346 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 VPS33BQ9H267 617 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 STX18Q9P2W9 335 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 APOBEC2Q9Y235 224 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 C2CD2Q9Y426 696 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 SNX10Q9Y5X0 201 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 SULT1E1P49888 294 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 IRF9Q00978 393 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 ADIGQ0VDE8 80 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 ACAP1Q15027 740 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 C6orf163Q5TEZ5 329 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 CATSPER4Q7RTX7 472 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 HPS6Q86YV9 775 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 WDR75Q8IWA0 830 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 PNPLA1Q8N8W4 532 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 ACVR1CQ8NER5 493 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 ZNF483Q8TF39 744 aaPredicted RBP14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 P2RY11Q96G91 374 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 C7orf26Q96N11 449 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 CCDC106Q9BWC9 280 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 RNF39Q9H2S5 420 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 ASB7Q9H672 318 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 SCOCQ9UIL1 159 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 PCDHA11Q9Y5I1 949 aa14.44□□□□□ -0.1
CACNA1A-228ENST00000636610 FAM159BA6NKW6 160 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 BEST1O76090 585 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 CRHR1P34998 444 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 MRPS35P82673 323 aaKnown RBP14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 TEDDM1Q5T9Z0 273 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 IL31Q6EBC2 164 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 PACS1Q6VY07 963 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 MAVSQ7Z434 540 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 PIWIL2Q8TC59 973 aaKnown RBP14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 FAM136AQ96C01 138 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 MARK4Q96L34 752 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 ZNF184Q99676 751 aaPredicted RBP14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 TUBB6Q9BUF5 446 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 PRDM12Q9H4Q4 367 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 NDE1Q9NXR1 346 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 LRCH1Q9Y2L9 728 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 TIMM13Q9Y5L4 95 aaPredicted RBP14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 PARP14Q460N5 1801 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 E7ENQ6 273 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 SPTLC1O15269 473 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 GSRP00390 522 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 AVPR1AP37288 418 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 ARL4AP40617 200 aa14.43□□□□□ -0.1
CACNA1A-228ENST00000636610 CUL3Q13618 768 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms