RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 PPP1R14DQ9NXH3 145 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 PAK5Q9P286 719 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 GGA2Q9UJY4 613 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 SPTA1P02549 2419 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 ANKARQ7Z5J8 1434 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 A0A0G2JMP0 313 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 LIN7AO14910 233 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-212ENST00000636194 CKMP06732 381 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 ZCCHC18P0CG32 403 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 ELOAQ14241 798 aaKnown RBP6.15□□□□□ -1.43
SCN1A-212ENST00000636194 INAVAQ3KP66 663 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 ZC2HC1CQ53FD0 456 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-212ENST00000636194 GARNL3Q5VVW2 1013 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 BROXQ5VW32 411 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 CES5AQ6NT32 575 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 QSOX2Q6ZRP7 698 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 KDELC2Q7Z4H8 507 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 OR4M2Q8NGB6 313 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 S100ZQ8WXG8 99 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 SEC16BQ96JE7 1060 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 MTMR12Q9C0I1 747 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 GPC6Q9Y625 555 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-212ENST00000636194 MAGI1Q96QZ7 1491 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 OR14I1A6ND48 311 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 PHF20L1A8MW92 1017 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 SLCO1B7G3V0H7 640 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 DDX3YO15523 660 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 FTCDO95954 541 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 IFNGP01579 166 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 USP17L8P0C7I0 530 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 RRM1P23921 792 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 FDFT1P37268 417 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TIMM10P62072 90 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 POU5F1Q01860 360 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 MGAT5BQ3V5L5 792 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 CYB5D1Q6P9G0 228 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 VASH1Q7L8A9 365 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 GJD3Q8N144 294 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TTLL6Q8N841 843 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ZFP28Q8NHY6 868 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TBCKQ8TEA7 893 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 NKD1Q969G9 470 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 C16orf58Q96GQ5 468 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TXN2Q99757 166 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 USB1Q9BQ65 265 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 MTA3Q9BTC8 594 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 RUSC1Q9BVN2 902 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 UGT2B28Q9BY64 529 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TM6SF1Q9BZW5 370 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 SENP6Q9GZR1 1112 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TAF1DQ9H5J8 278 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 MOCS1Q9NZB8 636 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TBC1D14Q9P2M4 693 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 SHOC2Q9UQ13 582 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 DRG1Q9Y295 367 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 LOC100653049A0A140TA62 436 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 PLIN3O60664 434 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ITIH1P19827 911 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ZAP70P43403 619 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 HK2P52789 917 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF445P59923 1031 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 MAD2L1BPQ15013 274 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TAF5Q15542 800 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 GPR139Q6DWJ6 353 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 CIAPIN1Q6FI81 312 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 RFX8Q6ZV50 586 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 CIR1Q86X95 450 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 RGL4Q8IZJ4 473 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 OSBPL8Q9BZF1 889 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 RSPH9Q9H1X1 276 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 NDST4Q9H3R1 872 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 KDM5BQ9UGL1 1544 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 PGK1P00558 417 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ERCC1P07992 297 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 CYP2A6P11509 494 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 NQO1P15559 274 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 HOXB6P17509 224 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 CDH4P55283 916 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 EIF5AP63241 154 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 CACNB2Q08289 660 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 GALNTL5Q7Z4T8 443 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF605Q86T29 641 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 BRSK1Q8TDC3 778 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 HDAC2Q92769 488 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 APBB2Q92870 758 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 C1orf50Q9BV19 199 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 CRNNQ9UBG3 495 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 NARFQ9UHQ1 456 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TBC1D24Q9ULP9 559 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 SNX13Q9Y5W8 968 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 WDR19Q8NEZ3 1342 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 URB2Q14146 1524 aaKnown RBP6.14□□□□□ -1.43
SCN1A-212ENST00000636194 PRXQ9BXM0 1461 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 NUP160Q12769 1436 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 TCP11X1B4DZS4 312 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 IFNA16P05015 189 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 NR4A1P22736 598 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 AAGABQ6PD74 315 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ADGRG2Q8IZP9 1017 aa6.14□□□□□ -1.43
SCN1A-212ENST00000636194 ZSCAN1Q8NBB4 408 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms