RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 SNX1Q13596 522 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 PDK4Q16654 411 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 SLC39A12Q504Y0 691 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 TRABD2AQ86V40 505 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 LRRTM3Q86VH5 581 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 LMNTD2Q8IXW0 634 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 CYP4X1Q8N118 509 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 THEM5Q8N1Q8 247 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 C12orf76Q8N812 135 aaPredicted RBP16.04■□□□□ 0.16
CLN8-209ENST00000635970 OR6B3Q8NGW1 331 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 DENND1AQ8TEH3 1009 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 STK32AQ8WU08 396 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 HLA-CQ95604 372 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 BCO2Q9BYV7 579 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 DPEP3Q9H4B8 488 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 SSU72Q9NP77 194 aaKnown RBP16.04■□□□□ 0.16
CLN8-209ENST00000635970 SAR1AQ9NR31 198 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 CDH22Q9UJ99 828 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 FBXW11Q9UKB1 542 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 PHTF1Q9UMS5 762 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 PDGFRBP09619 1106 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 GCKP35557 465 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 MAGEA4P43358 317 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 GCNT1Q02742 428 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 ZC3H12AQ5D1E8 599 aaKnown RBP16.04■□□□□ 0.16
CLN8-209ENST00000635970 WDR44Q5JSH3 913 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 KREMEN2Q8NCW0 462 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 ZNF461Q8TAF7 563 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 CASP10Q92851 521 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 KAT5Q92993 513 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 LPIN3Q9BQK8 851 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 ZCWPW1Q9H0M4 648 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 MYLK2Q9H1R3 596 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 SPATS2LQ9NUQ6 558 aaKnown RBP16.04■□□□□ 0.16
CLN8-209ENST00000635970 TMLHEQ9NVH6 421 aa16.04■□□□□ 0.16
CLN8-209ENST00000635970 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.03■□□□□ 0.16
CLN8-209ENST00000635970 A8MUI8 341 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 RFPL2O75678 378 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 ABLIM3O94929 683 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 UNGP13051 313 aaPredicted RBP16.03■□□□□ 0.16
CLN8-209ENST00000635970 P4HA1P13674 534 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 CD58P19256 250 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 FOXN2P32314 431 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 LHX1P48742 406 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 WDR4P57081 412 aaKnown RBP16.03■□□□□ 0.16
CLN8-209ENST00000635970 MRPS35P82673 323 aaKnown RBP16.03■□□□□ 0.16
CLN8-209ENST00000635970 ADCY1Q08828 1119 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 IZUMO3Q5VZ72 239 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 ANKRD54Q6NXT1 300 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 DRICH1Q6PGQ1 229 aaPredicted RBP16.03■□□□□ 0.16
CLN8-209ENST00000635970 TMEM184AQ6ZMB5 413 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 RHOT1Q8IXI2 618 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 MCOLN2Q8IZK6 566 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 TTC9BQ8N6N2 239 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.03■□□□□ 0.16
CLN8-209ENST00000635970 ACBD6Q9BR61 282 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 CRISPLD1Q9H336 500 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 SNX25Q9H3E2 840 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 MLXIPLQ9NP71 852 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 FETUBQ9UGM5 382 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 LNPEPQ9UIQ6 1025 aa16.03■□□□□ 0.16
CLN8-209ENST00000635970 MTMR11A4FU01 709 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 EDF1O60869 148 aaKnown RBP16.02■□□□□ 0.16
CLN8-209ENST00000635970 SEC24AO95486 1093 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 GNL1P36915 607 aaPredicted RBP16.02■□□□□ 0.16
CLN8-209ENST00000635970 SLC45A4Q5BKX6 768 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 INTS6LQ5JSJ4 861 aaKnown RBP16.02■□□□□ 0.16
CLN8-209ENST00000635970 SYCE2Q6PIF2 218 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.02■□□□□ 0.16
CLN8-209ENST00000635970 KATNAL2Q8IYT4 538 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 SLC7A14Q8TBB6 771 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 LRRC8CQ8TDW0 803 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 UTP4Q969X6 686 aaKnown RBP16.02■□□□□ 0.16
CLN8-209ENST00000635970 ERP27Q96DN0 273 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 DOCK6Q96HP0 2047 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 VCPIP1Q96JH7 1222 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 MSLNLQ96KJ4 702 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 SMC6Q96SB8 1091 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 SYT15Q9BQS2 421 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 CRTAC1Q9NQ79 661 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 ZFATQ9P243 1243 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 CHORDC1Q9UHD1 332 aaPredicted RBP16.02■□□□□ 0.16
CLN8-209ENST00000635970 TBK1Q9UHD2 729 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 SLC24A2Q9UI40 661 aa16.02■□□□□ 0.16
CLN8-209ENST00000635970 EXOC1LA0A1B0GW35 172 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 MYBPHLA2RUH7 354 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 A8MXQ7 604 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 PROSCO94903 275 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 C8AP07357 584 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 SRGAP2BP0DMP2 458 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 TSPY1Q01534 308 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 GPR17Q13304 367 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 TSNAXIP1Q2TAA8 658 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 KIRREL3Q8IZU9 778 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 ATAD1Q8NBU5 361 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 EXD1Q8NHP7 514 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 SPATA18Q8TC71 538 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 TWNKQ96RR1 684 aa16.02■□□□□ 0.15
CLN8-209ENST00000635970 RBM15Q96T37 977 aaKnown RBP eCLIP16.02■□□□□ 0.152e-6■■■■□ 23.2
CLN8-209ENST00000635970 PKMYT1Q99640 499 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms