RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 SMIM23A6NLE4 172 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 SRRM3A6NNA2 597 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 NT5C1B-RDH14C9J2C7 533 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 LRIG2O94898 1065 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 C1QAP02745 245 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 LSP1P33241 339 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 PBX3P40426 434 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 USP46P62068 366 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 GNGT1P63211 74 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 GPR17Q13304 367 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 DDR2Q16832 855 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 ARL13BQ3SXY8 428 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 HP1BP3Q5SSJ5 553 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 MANEALQ5VSG8 457 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 TTC19Q6DKK2 380 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 ZNF280DQ6N043 979 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 MSANTD2Q6P1R3 559 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 ZNF534Q76KX8 674 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 TAS1R1Q7RTX1 841 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 CAND1Q86VP6 1230 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 IGDCC3Q8IVU1 814 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 NUP93Q8N1F7 819 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 NPWQ8N729 165 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 STKLD1Q8NE28 680 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 MCUQ8NE86 351 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 DIS3LQ8TF46 1054 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 TFB1MQ8WVM0 346 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 MAML1Q92585 1016 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 CASP10Q92851 521 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 ZNF333Q96JL9 665 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 PPP1R12CQ9BZL4 782 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 KLC2Q9H0B6 622 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 PRDM12Q9H4Q4 367 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 OR12D3Q9UGF7 316 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 LRFN2Q9ULH4 789 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 PCDHB5Q9Y5E4 795 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 PTPRSQ13332 1948 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 MTMR11A4FU01 709 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 TBKBP1A7MCY6 615 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 TRIM66O15016 1216 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 CDH16O75309 829 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 HOXC13P31276 330 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 WASHC5Q12768 1159 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 SEMA5AQ13591 1074 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 BRMS1LQ5PSV4 323 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 SDHAF4Q5VUM1 108 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 HEATR6Q6AI08 1181 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 ZNF771Q7L3S4 317 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 MON1AQ86VX9 555 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 CEP57Q86XR8 500 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 PDIK1LQ8N165 341 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 NETO2Q8NC67 525 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 ZSCAN18Q8TBC5 510 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 P2RY11Q96G91 374 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 VN1R3Q9BXE9 311 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 CWH43Q9H720 699 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 PLAC1Q9HBJ0 212 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 FETUBQ9UGM5 382 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 RABGEF1Q9UJ41 708 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 SNX10Q9Y5X0 201 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 RAD54BQ9Y620 910 aa12.92□□□□□ -0.34
CACNA1A-219ENST00000635917 NYNRINQ9P2P1 1898 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 A0A0A0MRY4 1105 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 A0A1W2PQH9 124 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 KCNU1A8MYU2 1149 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 TSHRP16473 764 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 TPSB2P20231 275 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 SSTR1P30872 391 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 TPI1P60174 286 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 ELAVL2Q12926 359 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 PPP2R5DQ14738 602 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 PDK1Q15118 436 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 TPSAB1Q15661 275 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 ANKRD20A2Q5SQ80 823 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 FAXCQ5TGI0 409 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 ANKRD20A1Q5TYW2 823 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 ANKRD20A3Q5VUR7 823 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 DEFB128Q7Z7B8 93 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 ANKMY2Q8IV38 441 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 SCN4BQ8IWT1 228 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 LRRC43Q8N309 656 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 RIBC1Q8N443 379 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 FBXO36Q8NEA4 188 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 KCNV2Q8TDN2 545 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 SLC39A13Q96H72 371 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 SPATA13Q96N96 652 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 PGLYRP2Q96PD5 576 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 HAPLN3Q96S86 360 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 DHRS4Q9BTZ2 278 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 BEGAINQ9BUH8 593 aa12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 FRMD8Q9BZ67 464 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 CNOT10Q9H9A5 744 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-219ENST00000635917 AVILO75366 819 aa12.9□□□□□ -0.34
CACNA1A-219ENST00000635917 IVLP07476 585 aa12.9□□□□□ -0.34
CACNA1A-219ENST00000635917 CREB1P16220 341 aa12.9□□□□□ -0.34
CACNA1A-219ENST00000635917 SMARCB1Q12824 385 aa12.9□□□□□ -0.34
CACNA1A-219ENST00000635917 CCDC38Q502W7 563 aa12.9□□□□□ -0.34
CACNA1A-219ENST00000635917 BTBD8Q5XKL5 378 aa12.9□□□□□ -0.34
CACNA1A-219ENST00000635917 RNF19BQ6ZMZ0 732 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms