RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 A0A0G2JND7 137 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 LILRA4P59901 499 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 RFX8Q6ZV50 586 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 PGAP3Q96FM1 320 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-210ENST00000635776 ADAMTS10Q9H324 1103 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 MINDY3Q9H8M7 445 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 FZD1Q9UP38 647 aa4.69□□□□□ -1.66
SCN1A-210ENST00000635776 TMEM114B3SHH9 223 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 SPAG7O75391 227 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 FAM155BO75949 473 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 BNIP1Q12981 228 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 FRG1Q14331 258 aaKnown RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 SOWAHAQ2M3V2 549 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 TIFABQ6ZNK6 161 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 MARK2Q7KZI7 788 aaKnown RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 UNC45BQ8IWX7 931 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 TCP10LQ8TDR4 215 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 ZNF75CPQ92670 426 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 PCDHB5Q9Y5E4 795 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 GPC4O75487 556 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 CRABP2P29373 138 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 SCAPQ12770 1279 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 KBTBD12Q3ZCT8 623 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 MDH1BQ5I0G3 518 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 KIAA0408Q6ZU52 694 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 FAM131BQ86XD5 332 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 SCUBE3Q8IX30 993 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 WDTC1Q8N5D0 677 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 STKLD1Q8NE28 680 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 OSBPL2Q9H1P3 480 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 RPS6KL1Q9Y6S9 549 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 SYNJ2BP-COX16A0A087WUM0 186 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 CCNCP24863 283 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 SSTR1P30872 391 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 YWHAHQ04917 246 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 SEPT8Q92599 483 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 JADE3Q92613 823 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 ULBP1Q9BZM6 244 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 COX16Q9P0S2 106 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 DYTNA2CJ06 578 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 HEATR9A2RTY3 570 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 TRPC5OSA6NMA1 111 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 RBP1P09455 135 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 HNRNPH1P31943 449 aaKnown RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 ADIGQ0VDE8 80 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 XKR4Q5GH76 650 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 PCID2Q5JVF3 399 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 GLRA4Q5JXX5 417 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 METTL21CQ5VZV1 264 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 RWDD4Q6NW29 188 aaKnown RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 ZNF557Q8N988 423 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 CATSPER1Q8NEC5 780 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 MRPL45Q9BRJ2 306 aaKnown RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 HAPLN2Q9GZV7 340 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 RABGEF1Q9UJ41 708 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 ABT1Q9ULW3 272 aaKnown RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 TCRBV9S1A1TA0A576 114 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 ZBTB42B2RXF5 422 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 RNF103O00237 685 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 SYN3O14994 580 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 PRKCHP24723 683 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 GRIK1P39086 918 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 NOGQ13253 232 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 PAFAH1B3Q15102 231 aaKnown RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 ZBTB6Q15916 424 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 PMF1Q6P1K2 205 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 ELMSAN1Q6PJG2 1045 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 TMPRSS6Q8IU80 811 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 SP110Q9HB58 689 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 HAS3O00219 553 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 CA12O43570 354 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 GRAP2O75791 330 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 SSTR3P32745 418 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 OXCT1P55809 520 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 DAOAP59103 153 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 VEPH1Q14D04 833 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 TEX9Q8N6V9 391 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 PDCD7Q8N8D1 485 aaKnown RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 FAM118BQ9BPY3 351 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 DCLRE1BQ9H816 532 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 PPARGC1AQ9UBK2 798 aaKnown RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 FZD10Q9ULW2 581 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 CCDC189A1A4V9 331 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 TADA2AO75478 443 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 SESN2P58004 480 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 TMEM62Q0P6H9 643 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 KCNJ11Q14654 390 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 METTL3Q86U44 580 aaKnown RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 PCDH19Q8TAB3 1148 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 OLIG1Q8TAK6 271 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 ZNF669Q96BR6 464 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 EPS15L1Q9UBC2 864 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 GTF2IRD1Q9UHL9 959 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 VANGL2Q9ULK5 521 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 CORO1CQ9ULV4 474 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 ST3GAL5Q9UNP4 418 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 SLC22A2O15244 555 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 ADCY6O43306 1168 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 CRHR1P34998 444 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 THPOP40225 353 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms