RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 RBM12Q9NTZ6 932 aaKnown RBP15.3■□□□□ 0.04
CDC42BPB-209ENST00000634889 PARVAQ9NVD7 372 aa15.3■□□□□ 0.04
CDC42BPB-209ENST00000634889 DNAJC17Q9NVM6 304 aaKnown RBP15.3■□□□□ 0.04
CDC42BPB-209ENST00000634889 COX16Q9P0S2 106 aa15.3■□□□□ 0.04
CDC42BPB-209ENST00000634889 CALCOCO1Q9P1Z2 691 aa15.3■□□□□ 0.04
CDC42BPB-209ENST00000634889 FBXO10Q9UK96 956 aa15.3■□□□□ 0.04
CDC42BPB-209ENST00000634889 SSU72P8A0A1W2PR75 194 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 TYW5A2RUC4 315 aaKnown RBP15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 AKR1B15C9JRZ8 316 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 ENDOD1O94919 500 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 HOXD9P28356 352 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 SLC6A4P31645 630 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 RFC1P35251 1148 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 TNFRSF4P43489 277 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 KDSRQ06136 332 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 MTAPQ13126 283 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 RNF43Q68DV7 783 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 GRAMD4Q6IC98 578 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 PLEKHA7Q6IQ23 1121 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 WDR59Q6PJI9 974 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 STRADAQ7RTN6 431 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 PHLDB2Q86SQ0 1253 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 C1orf210Q8IVY1 113 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 SPEM1Q8N4L4 309 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 ZNF557Q8N988 423 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 TERB1Q8NA31 727 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 HJURPQ8NCD3 748 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 RXFP2Q8WXD0 754 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 EZH1Q92800 747 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 BHMTQ93088 406 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 P2RY11Q96G91 374 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 SPATA6Q9NWH7 488 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 ARHGEF38Q9NXL2 777 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 PLK2Q9NYY3 685 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 XPO7Q9UIA9 1087 aaKnown RBP15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 SLC27A6Q9Y2P4 619 aa15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 ARIH1Q9Y4X5 557 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPB-209ENST00000634889 A0A087X0T9 212 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 GOLGA6L7A0A1B0GV03 622 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 CHURC1-FNTBB4DL54 471 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 K7EQS6 105 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 ATG13O75143 517 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 RNF40O75150 1001 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 FAM228BP0C875 321 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 DESP17661 470 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 GPD1P21695 349 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 CCR3P51677 355 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 ZNF143P52747 638 aaPredicted RBP15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 ADKP55263 362 aaKnown RBP15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 ATP11AP98196 1134 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 MAMLD1Q13495 774 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 CCDC14Q49A88 953 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 MS4A13Q5J8X5 152 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 TTC39BQ5VTQ0 682 aaPredicted RBP15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 RFWD3Q6PCD5 774 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 DCUN1D2Q6PH85 259 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 Q6ZS52 159 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 KCNV2Q8TDN2 545 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 CENPIQ92674 756 aaPredicted RBP15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 PRICKLE1Q96MT3 831 aaPredicted RBP15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 MCEEQ96PE7 176 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 PRMT1Q99873 361 aaKnown RBP15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 TKTL2Q9H0I9 626 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 PRMT8Q9NR22 394 aaPredicted RBP15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 SCINQ9Y6U3 715 aa15.28■□□□□ 0.04
CDC42BPB-209ENST00000634889 TBC1D3BA6NDS4 549 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 F5H5T6 163 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 LAMTOR5O43504 91 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 TSPAN3O60637 253 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 TBL1XO60907 577 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 PAPSS2O95340 614 aaPredicted RBP15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 GJB6O95452 261 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 CISD3P0C7P0 127 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 COL9A1P20849 921 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 TACR2P21452 398 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 EIF4A3P38919 411 aaKnown RBP15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 SGSHP51688 502 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 RPL7AP62424 266 aaKnown RBP15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 MRPS21P82921 87 aaKnown RBP15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 MESP2Q0VG99 397 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 GAS6Q14393 721 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 ANGPT1Q15389 498 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 SLC18A3Q16572 532 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 HSF5Q4G112 596 aaPredicted RBP15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 RAP1GAP2Q684P5 730 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 ALKBH5Q6P6C2 394 aaKnown RBP15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 CHSY1Q86X52 802 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 ACDQ96AP0 544 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 ZNF653Q96CK0 615 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 CNPY3Q9BT09 278 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 IRF2BPLQ9H1B7 796 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 DEF6Q9H4E7 631 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 MRPL47Q9HD33 250 aaKnown RBP15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 CNOT8Q9UFF9 292 aaKnown RBP15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 FBXO4Q9UKT5 387 aa15.27■□□□□ 0.04
CDC42BPB-209ENST00000634889 ATMINO43313 823 aaPredicted RBP15.26■□□□□ 0.03
CDC42BPB-209ENST00000634889 PAGE1O75459 146 aa15.26■□□□□ 0.03
CDC42BPB-209ENST00000634889 ADCY5O95622 1261 aa15.26■□□□□ 0.03
CDC42BPB-209ENST00000634889 PTPN5P54829 565 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms