RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 P2RY11Q96G91 374 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 SGSM3Q96HU1 749 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 SEC16BQ96JE7 1060 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 MAGEB18Q96M61 343 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 SPATA13Q96N96 652 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 TSGA13Q96PP4 275 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 FAM193BQ96PV7 902 aaPredicted RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 TMEM209Q96SK2 561 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 VAT1Q99536 393 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 EBNA1BP2Q99848 306 aaKnown RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 WDR83Q9BRX9 315 aaKnown RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 TMEM175Q9BSA9 504 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.74□□□□□ -1.49
NEK3-211ENST00000629912 TRABDQ9H4I3 376 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 PRDM12Q9H4Q4 367 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 KCNK9Q9NPC2 374 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 ANLNQ9NQW6 1124 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 TBC1D13Q9NVG8 400 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 DDIT4Q9NX09 232 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 ARHGEF38Q9NXL2 777 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 SAGE1Q9NXZ1 904 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.74□□□□□ -1.49
NEK3-211ENST00000629912 IGSF9Q9P2J2 1179 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 CTNNAL1Q9UBT7 734 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 ZNF180Q9UJW8 692 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 TRHDEQ9UKU6 1024 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 SMG5Q9UPR3 1016 aaKnown RBP5.74□□□□□ -1.49
NEK3-211ENST00000629912 SCML2Q9UQR0 700 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 PCDHB7Q9Y5E2 793 aa5.74□□□□□ -1.49
NEK3-211ENST00000629912 IQANK1A0A1B0GTG1 560 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 TCRBV9S1A1TA0A576 114 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 FAM92AA1XBS5 289 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 SDR42E2A6NKP2 422 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 KCNU1A8MYU2 1149 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 FAM72CH0Y354 149 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 PSMD3O43242 534 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 HOXA2O43364 376 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 CREB3O43889 395 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 TYROBPO43914 113 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 TBC1D4O60343 1298 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 CACNG3O60359 315 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 B4GALT3O60512 393 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 NBNO60934 754 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 TADA2AO75478 443 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 BANF1O75531 89 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 ALDH1A2O94788 518 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 SUN1O94901 812 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 ASMTLO95671 621 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 APRTP07741 180 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 VAV1P15498 845 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 FGFR3P22607 806 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 YY1P25490 414 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 HOXC13P31276 330 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 STX2P32856 288 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 GRIK1P39086 918 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 OR1G1P47890 313 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 VEGFBP49765 207 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 RABGGTBP53611 331 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 CORO7P57737 925 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 TPI1P60174 286 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 YWHAGP61981 247 aaKnown RBP eCLIP5.73□□□□□ -1.49
NEK3-211ENST00000629912 COG7P83436 770 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 SLC18A2Q05940 514 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 PPIDQ08752 370 aaKnown RBP5.73□□□□□ -1.49
NEK3-211ENST00000629912 GALNT2Q10471 571 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 WASHC5Q12768 1159 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 ELAVL2Q12926 359 aaKnown RBP5.73□□□□□ -1.49
NEK3-211ENST00000629912 FRG1Q14331 258 aaKnown RBP5.73□□□□□ -1.49
NEK3-211ENST00000629912 ITIH4Q14624 930 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 TMED2Q15363 201 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 QPCTQ16769 361 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 PAN2Q504Q3 1202 aaKnown RBP5.73□□□□□ -1.49
NEK3-211ENST00000629912 ARTNQ5T4W7 220 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 LGSNQ5TDP6 509 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 FAM72AQ5TYM5 149 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 GKAP1Q5VSY0 366 aaPredicted RBP5.73□□□□□ -1.49
NEK3-211ENST00000629912 BTBD8Q5XKL5 378 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 STEAP4Q687X5 459 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 NUGGCQ68CJ6 796 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 FAM72DQ6L9T8 149 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 MSANTD2Q6P1R3 559 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 ZNF449Q6P9G9 518 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 SH2D5Q6ZV89 423 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 ZNF534Q76KX8 674 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 SCD5Q86SK9 330 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 SRLQ86TD4 932 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 TAC4Q86UU9 113 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 FAM72BQ86X60 149 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 LRRC49Q8IUZ0 686 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 KLHDC8BQ8IXV7 354 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 SRRM1Q8IYB3 904 aaKnown RBP5.73□□□□□ -1.49
NEK3-211ENST00000629912 LRRC34Q8IZ02 419 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 ZNF567Q8N184 647 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 NUP93Q8N1F7 819 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 AGGF1Q8N302 714 aaeCLIP5.73□□□□□ -1.49
NEK3-211ENST00000629912 ARHGAP18Q8N392 663 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 ZNF276Q8N554 614 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 LZTR1Q8N653 840 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 DBF4BQ8NFT6 615 aa5.73□□□□□ -1.49
NEK3-211ENST00000629912 DQX1Q8TE96 717 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms