RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 AARDQ4LEZ3 155 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 RNF220Q5VTB9 566 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 MEX3BQ6ZN04 569 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 SETD3Q86TU7 594 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 DNAAF5Q86Y56 855 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 FAM178BQ8IXR5 827 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 ANKRD52Q8NB46 1076 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 KDM1BQ8NB78 822 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 MCPH1Q8NEM0 835 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 PRR7Q8TB68 274 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 NSMCE2Q96MF7 247 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 TMEM68Q96MH6 324 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 ZIM3Q96PE6 472 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 MMS19Q96T76 1030 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 CYTH2Q99418 400 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 SSX3Q99909 188 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 C6orf62Q9GZU0 229 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 PSMC3IPQ9P2W1 217 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 PRKAG3Q9UGI9 489 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 SEPT3Q9UH03 358 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 MLXQ9UH92 298 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 LHX6Q9UPM6 363 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 NFE2L3Q9Y4A8 694 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 ZFP37Q9Y6Q3 630 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 MAGEA13PA6NCF6 341 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 NOP56O00567 594 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 SMAD6O43541 496 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 FTCDO95954 541 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 TPBGLP0DKB5 382 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 NMT1P30419 496 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 STAT5BP51692 787 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 CAPZA1P52907 286 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 CASP9P55211 416 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 ACTR1AP61163 376 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 ALDH6A1Q02252 535 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 GLO1Q04760 184 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 PPARAQ07869 468 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 ERV3-1Q14264 604 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 HIC1Q14526 733 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 SSPNQ14714 243 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 RINT1Q6NUQ1 792 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 UNC13DQ70J99 1090 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 EPM2AIP1Q7L775 607 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 TMPRSS9Q7Z410 1059 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 C8orf58Q8NAV2 365 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 LRRC20Q8TCA0 184 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 HTRA1Q92743 480 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 C1orf21Q9H246 121 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 GUCA1BQ9UMX6 200 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC12A4Q9UP95 1085 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 DNAJC16Q9Y2G8 782 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 PCDHGA10Q9Y5H3 936 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 PEAK1Q9H792 1746 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 A0A1B0GTH6 734 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 A0A1W2PPH5 198 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 KBTBD13C9JR72 458 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 H0YAE9 185 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 WRBO00258 174 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 GATCO43716 136 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 IL6P05231 212 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 IGFBP1P08833 259 aaPredicted RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 ACADSP16219 412 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 TNNI1P19237 187 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 CHRM3P20309 590 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 KCNAB2Q13303 367 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 MTF1Q14872 753 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 SGCAQ16586 387 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 LRRC36Q1X8D7 754 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 RGS21Q2M5E4 152 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 SUPT20HL1Q3ZLR7 823 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 AGBL2Q5U5Z8 902 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 KANK2Q63ZY3 851 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 C3orf33Q6P1S2 294 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 IQCKQ8N0W5 287 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 CADM3Q8N126 398 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 SH2D3CQ8N5H7 860 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 LINC00301Q8NCQ3 95 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 PXYLP1Q8TE99 480 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 DTD1Q8TEA8 209 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 METTL21AQ8WXB1 218 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 MAP4K1Q92918 833 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC22A18Q96BI1 424 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 COX4I2Q96KJ9 171 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 PKP4Q99569 1192 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 HSD3B7Q9H2F3 369 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 EIF2B3Q9NR50 452 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 METTL5Q9NRN9 209 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 INIPQ9NRY2 104 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 EMILIN3Q9NT22 766 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 RNF14Q9UBS8 474 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC22A14Q9Y267 594 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 OVOS2A0A0G2JMS6 1433 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 OVOS2A0A0J9YW53 1432 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 OVOS2Q6IE36 1432 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 A6NLC8 198 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 TNPO2O14787 897 aaKnown RBP3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 FAM13AO94988 1023 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 UPP2O95045 317 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 PGLSO95336 258 aa3.99□□□□□ -1.77
R3HDM1-220ENST00000628915 ZBTB11O95625 1053 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms