RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 CNPP09543 421 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 FAM153BP0C7A2 387 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 FNTAP49354 379 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 SULT1E1P49888 294 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 USP46P62068 366 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 SMARCB1Q12824 385 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 GPR17Q13304 367 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 SNX1Q13596 522 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 CCNG2Q16589 344 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 DDR2Q16832 855 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 USP41Q3LFD5 358 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 FAM153CQ494X1 144 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 SLC8B1Q6J4K2 584 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 VSTM1Q6UX27 236 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 BBS12Q6ZW61 710 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 SCD5Q86SK9 330 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 FAM131BQ86XD5 332 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 MAP7D3Q8IWC1 876 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 SCN4BQ8IWT1 228 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 DTWD2Q8NBA8 298 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 IRGQQ8WZA9 623 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 C8orf48Q96LL4 319 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 FUT8Q9BYC5 575 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 RXFP1Q9HBX9 757 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 PCDH18Q9HCL0 1135 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 OSER1Q9NX31 292 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 IL37Q9NZH6 218 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 SAE1Q9UBE0 346 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 MTRRQ9UBK8 725 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 FAM153AQ9UHL3 310 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 RASAL2Q9UJF2 1139 aa9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 UTP11Q9Y3A2 253 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-223ENST00000627587 WDR27A2RRH5 827 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 FAM187AA6NFU0 413 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 TRIM66O15016 1216 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 DAPK3O43293 454 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 LIASO43766 372 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 PAPLNO95428 1278 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 IGLV3-25P01717 112 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 PECAM1P16284 738 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 RPL17P18621 184 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 IVDP26440 423 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 L1CAMP32004 1257 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 MAGEA11P43364 429 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 CDH6P55285 790 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 ARPP19P56211 112 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 CREMQ03060 361 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 OASLQ15646 514 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 DPYSL2Q16555 572 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 ERMARDQ5T6L9 678 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 BSPRYQ5W0U4 402 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 PYROXD2Q8N2H3 581 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 PQLC3Q8N755 202 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 ADAM32Q8TC27 787 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 SPPL2BQ8TCT7 592 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 PIK3R5Q8WYR1 880 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 EDEM1Q92611 657 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 FAF2Q96CS3 445 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 PGAP3Q96FM1 320 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 CLSTN3Q9BQT9 956 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 ERP44Q9BS26 406 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 TRIM62Q9BVG3 475 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 CALN1Q9BXU9 219 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 RAB17Q9H0T7 212 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 NMUR1Q9HB89 426 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 RRN3Q9NYV6 651 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 GRHL1Q9NZI5 618 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 EPS15L1Q9UBC2 864 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 DNPEPQ9ULA0 475 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 NFU1Q9UMS0 254 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 CDY1Q9Y6F8 540 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 DENND4AQ7Z401 1863 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 CCDC195A0A1B0GUA6 201 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 FAM92AA1XBS5 289 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 M0QYT0 321 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 MAP2K7O14733 419 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 CST8O60676 142 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 GLUD1P00367 558 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 NCAM1P13591 858 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 GLUD2P49448 558 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 ROR1Q01973 937 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 KRT81Q14533 505 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 PDK2Q15119 407 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 ARTNQ5T4W7 220 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 CWF19L1Q69YN2 538 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 DRICH1Q6PGQ1 229 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 MTERF4Q7Z6M4 381 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 PLD5Q8N7P1 536 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 GLIS1Q8NBF1 620 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 PCDH19Q8TAB3 1148 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 SLC35B2Q8TB61 432 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 GPR152Q8TDT2 470 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 GRK7Q8WTQ7 553 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 C2orf15Q8WU43 125 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 HAUS1Q96CS2 278 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 GDAP1L1Q96MZ0 367 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 KCTD15Q96SI1 283 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 SMOC2Q9H3U7 446 aa9.85□□□□□ -0.83
PDLIM5-223ENST00000627587 ZDHHC18Q9NUE0 388 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms