RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 KRT39Q6A163 491 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 ATL3Q6DD88 541 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 SERPINA13PQ6UXR4 307 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 FMNL3Q8IVF7 1028 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 RHBDD1Q8TEB9 315 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 EDEM1Q92611 657 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 BIRC7Q96CA5 298 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 CRELD1Q96HD1 420 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 CDK5RAP1Q96SZ6 601 aaKnown RBP11.54□□□□□ -0.56
DDX41-218ENST00000625286 EBF2Q9HAK2 575 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 TM9SF3Q9HD45 589 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 ABCB8Q9NUT2 735 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.54□□□□□ -0.56
DDX41-218ENST00000625286 PCDHGB2Q9Y5G2 931 aa11.54□□□□□ -0.56
DDX41-218ENST00000625286 DOCK9Q9BZ29 2069 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 PLXNA2O75051 1894 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 FAM149AA5PLN7 773 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 TRABD2BA6NFA1 517 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 GOLGA8CPA6NN73 597 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 C10orf142B7Z368 130 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 H0Y8X5 98 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 MSI1O43347 362 aaKnown RBP11.53□□□□□ -0.56
DDX41-218ENST00000625286 CER1O95813 267 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 ACADMP11310 421 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 SLC6A4P31645 630 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 GTF2H1P32780 548 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 CD70P32970 193 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 ENPEPQ07075 957 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 GOLGA7BQ2TAP0 167 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 CBWD6Q4V339 395 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 PKDCCQ504Y2 493 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 MPPE1Q53F39 396 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 CBWD3Q5JTY5 395 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 CBWD5Q5RIA9 395 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 PRAMEF14Q5SWL7 426 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 BSPRYQ5W0U4 402 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 RFWD3Q6PCD5 774 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 CHST9Q7L1S5 443 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 RSRC2Q7L4I2 434 aaKnown RBP11.53□□□□□ -0.56
DDX41-218ENST00000625286 SMYD4Q8IYR2 804 aaPredicted RBP11.53□□□□□ -0.56
DDX41-218ENST00000625286 GUF1Q8N442 669 aaKnown RBP11.53□□□□□ -0.56
DDX41-218ENST00000625286 UBR7Q8N806 425 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.53□□□□□ -0.56
DDX41-218ENST00000625286 UBA3Q8TBC4 463 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 PLD4Q96BZ4 506 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 MYO19Q96H55 970 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 ZSWIM1Q9BR11 485 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 IMPG2Q9BZV3 1241 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 LHX5Q9H2C1 402 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 GOLPH3LQ9H4A5 285 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 RAB20Q9NX57 234 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 CFAP45Q9UL16 551 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 ANKRD6Q9Y2G4 727 aa11.53□□□□□ -0.56
DDX41-218ENST00000625286 TP53BP1Q12888 1972 aaPredicted RBP11.53□□□□□ -0.56
DDX41-218ENST00000625286 SETXQ7Z333 2677 aaKnown RBP11.53□□□□□ -0.56
DDX41-218ENST00000625286 KALRNO60229 2985 aa11.52□□□□□ -0.56
DDX41-218ENST00000625286 WNT9AO14904 365 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 XPO1O14980 1071 aaKnown RBP11.52□□□□□ -0.57
DDX41-218ENST00000625286 CALCAP01258 141 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 WNT1P04628 370 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 CYBBP04839 570 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 MYL1P05976 194 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 IGHV4-34P06331 123 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 KRT13P13646 458 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 AFF3P51826 1226 aaKnown RBP11.52□□□□□ -0.57
DDX41-218ENST00000625286 CLDN6P56747 220 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 IL9RQ01113 521 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 CYP4F3Q08477 520 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 ADIGQ0VDE8 80 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 FNDC3BQ53EP0 1204 aaKnown RBP11.52□□□□□ -0.57
DDX41-218ENST00000625286 FAM133BQ5BKY9 247 aaKnown RBP11.52□□□□□ -0.57
DDX41-218ENST00000625286 ADGRF1Q5T601 910 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 MBLAC2Q68D91 279 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 NADSYN1Q6IA69 706 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 IL27RAQ6UWB1 636 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 ARHGAP18Q8N392 663 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 FBXL13Q8NEE6 735 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 TFAP2BQ92481 460 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 SNX19Q92543 992 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 TMA16Q96EY4 203 aaKnown RBP11.52□□□□□ -0.57
DDX41-218ENST00000625286 PCED1AQ9H1Q7 454 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 OSGEPQ9NPF4 335 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 DKK4Q9UBT3 224 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 SERGEFQ9UGK8 458 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 USP25Q9UHP3 1055 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 GGA2Q9UJY4 613 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 TSPAN16Q9UKR8 245 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 INTS6Q9UL03 887 aaKnown RBP11.52□□□□□ -0.57
DDX41-218ENST00000625286 STRIP2Q9ULQ0 834 aa11.52□□□□□ -0.57
DDX41-218ENST00000625286 RNF225M0QZC1 329 aaPredicted RBP11.51□□□□□ -0.57
DDX41-218ENST00000625286 CBX4O00257 560 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 FLRT2O43155 660 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 FSBPO95073 299 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 SEMA4FO95754 770 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 IGLV3-27P01718 113 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 PABPC1P11940 636 aaKnown RBP11.51□□□□□ -0.57
DDX41-218ENST00000625286 TRIM21P19474 475 aaKnown RBP11.51□□□□□ -0.57
DDX41-218ENST00000625286 CTSKP43235 329 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 SYKP43405 635 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 MXI1P50539 228 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms