RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 DAB2P98082 770 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 ZNF211Q13398 564 aaPredicted RBP14.56□□□□□ -0.08
SNX1-214ENST00000625244 WDR72Q3MJ13 1102 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 ZSCAN23Q3MJ62 389 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 C3orf38Q5JPI3 329 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 C10orf120Q5SQS8 335 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 ZNF776Q68DI1 518 aaPredicted RBP14.56□□□□□ -0.08
SNX1-214ENST00000625244 KLHDC10Q6PID8 442 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 IGF2-ASQ6U949 168 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 USP30Q70CQ3 517 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 GPRIN1Q7Z2K8 1008 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 TRAPPC11Q7Z392 1133 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 FUKQ8N0W3 1084 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 OXR1Q8N573 874 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 EXTL1Q92935 676 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 SERAC1Q96JX3 654 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 SLC46A1Q96NT5 459 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 PABPC3Q9H361 631 aaKnown RBP14.56□□□□□ -0.08
SNX1-214ENST00000625244 MTG2Q9H4K7 406 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 FBXO44Q9H4M3 255 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 MRPL44Q9H9J2 332 aaKnown RBP14.56□□□□□ -0.08
SNX1-214ENST00000625244 FBRSQ9HAH7 460 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.56□□□□□ -0.08
SNX1-214ENST00000625244 FBXL12Q9NXK8 326 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 TBC1D7Q9P0N9 293 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 SEPT3Q9UH03 358 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 PLA2G4CQ9UP65 541 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 NCKAP1Q9Y2A7 1128 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 ZNF510Q9Y2H8 683 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 A0A1B0GVM2 712 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 A0A1W2PQH9 124 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 FAM87AP0C7U9 286 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 RBMS1P29558 406 aaKnown RBP14.55□□□□□ -0.08
SNX1-214ENST00000625244 TNNC1P63316 161 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 ZC3H3Q8IXZ2 948 aaKnown RBP14.55□□□□□ -0.08
SNX1-214ENST00000625244 GPD1LQ8N335 351 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 SLC25A45Q8N413 288 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 DDI1Q8WTU0 396 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 GOLGA1Q92805 767 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 CALML4Q96GE6 196 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 PSMG3-AS1Q96PY0 264 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 OSBPL2Q9H1P3 480 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 NEUROG2Q9H2A3 272 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 AGO1Q9UL18 857 aaKnown RBP14.55□□□□□ -0.08
SNX1-214ENST00000625244 SCML2Q9UQR0 700 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 MAN2B2Q9Y2E5 1009 aa14.55□□□□□ -0.08
SNX1-214ENST00000625244 A0A1W2PP55 124 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 PMS2P1A4D2B8 440 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 CLEC18AA5D8T8 446 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 LRRC72A6NJI9 287 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 CYBBP04839 570 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 HMBSP08397 361 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 HLA-FP30511 346 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 CORO1AP31146 461 aaKnown RBP14.54□□□□□ -0.08
SNX1-214ENST00000625244 CASP5P51878 434 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 MAP3K7CLP57077 242 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 ASIC1P78348 528 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 SGO2Q562F6 1265 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 HIST2H2BCQ6DN03 193 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 XKR5Q6UX68 686 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 CLEC18BQ6UXF7 455 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 TMC6Q7Z403 805 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 ADIPOR2Q86V24 386 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 CBWD2Q8IUF1 395 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 CLEC18CQ8NCF0 446 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 OR2T34Q8NGX1 318 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 CCDC97Q96F63 343 aaPredicted RBP14.54□□□□□ -0.08
SNX1-214ENST00000625244 PRR11Q96HE9 360 aaPredicted RBP14.54□□□□□ -0.08
SNX1-214ENST00000625244 CCNL2Q96S94 520 aaPredicted RBP14.54□□□□□ -0.08
SNX1-214ENST00000625244 ARHGAP9Q9BRR9 750 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 SLC2A11Q9BYW1 496 aa14.54□□□□□ -0.08
SNX1-214ENST00000625244 RSPH9Q9H1X1 276 aaPredicted RBP14.54□□□□□ -0.08
SNX1-214ENST00000625244 ENO4A6NNW6 628 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 MID1O15344 667 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 SLC26A4O43511 780 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 GCNT3O95395 438 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 CKMT1AP12532 417 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 CCDC130P13994 396 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 UBA7P41226 1012 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 CCR5P51681 352 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 ISXQ2M1V0 245 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 CHST9Q7L1S5 443 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 WDR49Q8IV35 697 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 DENND1CQ8IV53 801 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 SYCP3Q8IZU3 236 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 LARP4BQ92615 738 aaKnown RBP14.53□□□□□ -0.08
SNX1-214ENST00000625244 FGFBP2Q9BYJ0 223 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 SMYD3Q9H7B4 428 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 CSNK1G1Q9HCP0 422 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 UCKL1Q9NWZ5 548 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 CSMD1Q96PZ7 3565 aa14.53□□□□□ -0.08
SNX1-214ENST00000625244 ICE1Q9Y2F5 2266 aa14.52□□□□□ -0.08
SNX1-214ENST00000625244 ZNF233A6NK53 670 aa14.52□□□□□ -0.09
SNX1-214ENST00000625244 CDRT15L2A8MXV6 281 aa14.52□□□□□ -0.09
SNX1-214ENST00000625244 HOXD9P28356 352 aaPredicted RBP14.52□□□□□ -0.09
SNX1-214ENST00000625244 EHHADHQ08426 723 aa14.52□□□□□ -0.09
SNX1-214ENST00000625244 SURF1Q15526 300 aa14.52□□□□□ -0.09
SNX1-214ENST00000625244 SLC45A4Q5BKX6 768 aa14.52□□□□□ -0.09
SNX1-214ENST00000625244 SCD5Q86SK9 330 aa14.52□□□□□ -0.09
SNX1-214ENST00000625244 CPXM2Q8N436 756 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms