RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 RASAL2Q9UJF2 1139 aa13.19□□□□□ -0.3
PNKP-217ENST00000625216 STARD13Q9Y3M8 1113 aa13.19□□□□□ -0.3
PNKP-217ENST00000625216 TMCO5BA8MYB1 307 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 TULP2O00295 520 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 MDM4O15151 490 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 PJA2O43164 708 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 CACNG3O60359 315 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 TYRP14679 529 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 HOXC13P31276 330 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 MESP2Q0VG99 397 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 EFEMP1Q12805 493 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 CSRP2Q16527 193 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 CLEC16AQ2KHT3 1053 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 USP39Q53GS9 565 aaKnown RBP13.18□□□□□ -0.3
PNKP-217ENST00000625216 GRAMD4Q6IC98 578 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 ZNF662Q6ZS27 426 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 RASSF3Q86WH2 238 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 SIX6OS1Q8N1H7 587 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 CCDC33Q8N5R6 958 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 FAM160A2Q8N612 972 aaPredicted RBP13.18□□□□□ -0.3
PNKP-217ENST00000625216 TERB1Q8NA31 727 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 UBA3Q8TBC4 463 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 RNF139Q8WU17 664 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 IRGQQ8WZA9 623 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 C16orf45Q96MC5 204 aaPredicted RBP13.18□□□□□ -0.3
PNKP-217ENST00000625216 POLMQ9NP87 494 aaPredicted RBP13.18□□□□□ -0.3
PNKP-217ENST00000625216 LZTFL1Q9NQ48 299 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 ABCC13Q9NSE7 274 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 POLR3BQ9NW08 1133 aaPredicted RBP13.18□□□□□ -0.3
PNKP-217ENST00000625216 DLL3Q9NYJ7 618 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 USP18Q9UMW8 372 aa13.18□□□□□ -0.3
PNKP-217ENST00000625216 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.18□□□□□ -0.3
PNKP-217ENST00000625216 GOLGA6L9A6NEM1 432 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 NEDD8-MDP1E9PL57 170 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 RHOBTB1O94844 696 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 KLF8O95600 359 aaPredicted RBP13.17□□□□□ -0.3
PNKP-217ENST00000625216 KLKB1P03952 638 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 CYP1A1P04798 512 aaPredicted RBP13.17□□□□□ -0.3
PNKP-217ENST00000625216 CHRM1P11229 460 aaPredicted RBP13.17□□□□□ -0.3
PNKP-217ENST00000625216 TIE1P35590 1138 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 NOMO3P69849 1222 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 KDSRQ06136 332 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 SPEM2Q0P670 501 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 ADIGQ0VDE8 80 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 EMC10Q5UCC4 262 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 BSPRYQ5W0U4 402 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 TPGS1Q6ZTW0 290 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 BHLHA9Q7RTU4 235 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 PASD1Q8IV76 773 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 ALLCQ8N6M5 410 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 TXNDC5Q8NBS9 432 aaKnown RBP13.17□□□□□ -0.3
PNKP-217ENST00000625216 ZNF606Q8WXB4 792 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 PLD4Q96BZ4 506 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 RMDN1Q96DB5 314 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 PARD6AQ9NPB6 346 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 SEMA4GQ9NTN9 838 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 DNAJC17Q9NVM6 304 aaKnown RBP13.17□□□□□ -0.3
PNKP-217ENST00000625216 FBXO10Q9UK96 956 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 HBS1LQ9Y450 684 aaKnown RBP13.17□□□□□ -0.3
PNKP-217ENST00000625216 PCDHGA5Q9Y5G8 931 aa13.17□□□□□ -0.3
PNKP-217ENST00000625216 HELZP42694 1942 aaKnown RBP13.17□□□□□ -0.3
PNKP-217ENST00000625216 SLC12A8A0AV02 714 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 SGK1O00141 431 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 FBXO21O94952 628 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 CYBBP04839 570 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 H2AFZP0C0S5 128 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 UNGP13051 313 aaPredicted RBP13.16□□□□□ -0.3
PNKP-217ENST00000625216 CORO1AP31146 461 aaKnown RBP13.16□□□□□ -0.3
PNKP-217ENST00000625216 HARS2P49590 506 aaKnown RBP13.16□□□□□ -0.3
PNKP-217ENST00000625216 GALCP54803 685 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 DAOAP59103 153 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 BYSLQ13895 437 aaKnown RBP13.16□□□□□ -0.3
PNKP-217ENST00000625216 E2F5Q15329 346 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 TRIP4Q15650 581 aaPredicted RBP13.16□□□□□ -0.3
PNKP-217ENST00000625216 ELF2Q15723 593 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 PLK5Q496M5 336 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 C10orf76Q5T2E6 689 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 NAA35Q5VZE5 725 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 SDE2Q6IQ49 451 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 DENND1BQ6P3S1 775 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 H2AFVQ71UI9 128 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 KBTBD6Q86V97 674 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 CPXM2Q8N436 756 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 ZNF513Q8N8E2 541 aaPredicted RBP13.16□□□□□ -0.3
PNKP-217ENST00000625216 ARHGEF26Q96DR7 871 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 IRX2Q9BZI1 471 aaPredicted RBP13.16□□□□□ -0.3
PNKP-217ENST00000625216 ISCUQ9H1K1 167 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 SALL4Q9UJQ4 1053 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 AGO1Q9UL18 857 aaKnown RBP13.16□□□□□ -0.3
PNKP-217ENST00000625216 GUCA1BQ9UMX6 200 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 PCDHGC3Q9UN70 934 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 SLC27A6Q9Y2P4 619 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 DUSP10Q9Y6W6 482 aa13.16□□□□□ -0.3
PNKP-217ENST00000625216 YJEFN3A6XGL0 299 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 E7ENQ6 273 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 M0QYV0 167 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 GFRA2O00451 464 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 FANCGO15287 622 aa13.15□□□□□ -0.3
PNKP-217ENST00000625216 SART1O43290 800 aaKnown RBP13.15□□□□□ -0.3
PNKP-217ENST00000625216 MED7O43513 233 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms