RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 RNF139Q8WU17 664 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 KLHL25Q9H0H3 589 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 IARS2Q9NSE4 1012 aaKnown RBP12.11□□□□□ -0.47
ATRX-214ENST00000624166 DDX28Q9NUL7 540 aaKnown RBP12.11□□□□□ -0.47
ATRX-214ENST00000624166 DNAJC28Q9NX36 388 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 IGKV6D-41A0A0C4DH26 115 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 TRUB2O95900 331 aaKnown RBP12.11□□□□□ -0.47
ATRX-214ENST00000624166 HMGCRP04035 888 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 KLRC2P26717 231 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 PEX2P28328 305 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 MLH1P40692 756 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 GLRBP48167 497 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 DEFA1P59665 94 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 DEFA3P59666 94 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 TAF2Q6P1X5 1199 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 ISLR2Q6UXK2 745 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 SLC7A6OSQ96CW6 309 aaPredicted RBP12.11□□□□□ -0.47
ATRX-214ENST00000624166 C1orf50Q9BV19 199 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 PRDM16Q9HAZ2 1276 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 VANGL2Q9ULK5 521 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 CCDC78A2IDD5 438 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 TNPO2O14787 897 aaKnown RBP12.11□□□□□ -0.47
ATRX-214ENST00000624166 MRASO14807 208 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 ADCY6O43306 1168 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 PIGNO95427 931 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 CAP2P40123 477 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 INPP1P49441 399 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 KLF10Q13118 480 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 TMC7Q7Z402 723 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 HPS6Q86YV9 775 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 DHRSXQ8N5I4 330 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 TRIM62Q9BVG3 475 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 CLK4Q9HAZ1 481 aaKnown RBP12.11□□□□□ -0.47
ATRX-214ENST00000624166 SCN3BQ9NY72 215 aa12.11□□□□□ -0.47
ATRX-214ENST00000624166 SIN3BO75182 1162 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 ZMPSTE24O75844 475 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 RBP1P09455 135 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 S100A5P33763 92 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 EIF2B2P49770 351 aaKnown RBP12.1□□□□□ -0.47
ATRX-214ENST00000624166 GALK1P51570 392 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 ZNF143P52747 638 aaPredicted RBP12.1□□□□□ -0.47
ATRX-214ENST00000624166 SPIRE1Q08AE8 756 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 MTMR2Q13614 643 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 DPYSQ14117 519 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 FASTKQ14296 549 aaKnown RBP12.1□□□□□ -0.47
ATRX-214ENST00000624166 ANO4Q32M45 955 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 KCTD21Q4G0X4 260 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 KCNT2Q6UVM3 1135 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 TRIM74Q86UV6 250 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 TRIM73Q86UV7 250 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 SATL1Q86VE3 508 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 CPNE8Q86YQ8 564 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 FNIP1Q8TF40 1166 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 CAMTA1Q9Y6Y1 1673 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 C1orf232A0A0U1RR37 186 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 CFAP99D6REC4 459 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 HOXD13P35453 343 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 RAB15P59190 212 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 CDK18Q07002 472 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 ORC1Q13415 861 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 NOMO1Q15155 1222 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 DCAF6Q58WW2 860 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 GIPC3Q8TF64 312 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 BORCS5Q969J3 196 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 ASPSCR1Q9BZE9 553 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 NACA2Q9H009 215 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 C1orf21Q9H246 121 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 GNEQ9Y223 722 aaKnown RBP12.1□□□□□ -0.47
ATRX-214ENST00000624166 RAP2CQ9Y3L5 183 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 UBIAD1Q9Y5Z9 338 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 IQCA1LA6NCM1 817 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 ANXA9O76027 345 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 PIK3R1P27986 724 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 AQP4P55087 323 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 ANKRD22Q5VYY1 191 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 ZDHHC17Q8IUH5 632 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 SULF1Q8IWU6 871 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 DAPK2Q9UIK4 370 aa12.1□□□□□ -0.47
ATRX-214ENST00000624166 CPSF3Q9UKF6 684 aaKnown RBP12.1□□□□□ -0.47
ATRX-214ENST00000624166 LYPLA1O75608 230 aaPredicted RBP12.09□□□□□ -0.47
ATRX-214ENST00000624166 SUPT7LO94864 414 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 DSG3P32926 999 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 RGS21Q2M5E4 152 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 NPNTQ6UXI9 565 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 TTC30AQ86WT1 665 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 ZSCAN18Q8TBC5 510 aaPredicted RBP12.09□□□□□ -0.47
ATRX-214ENST00000624166 OSCP1Q8WVF1 389 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 USP6NLQ92738 828 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 WRNIP1Q96S55 665 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 SEMA6AQ9H2E6 1030 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 SPATA31A5Q5VU36 1347 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 SPATA31A7Q8IWB4 1347 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 IGLV3-22A0A075B6J6 115 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 NCAM2O15394 837 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 TYROBPO43914 113 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 MICAL2O94851 1124 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 DNAJB2P25686 324 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 PSME3P61289 254 aa12.09□□□□□ -0.47
ATRX-214ENST00000624166 KRR1Q13601 381 aaKnown RBP12.09□□□□□ -0.47
ATRX-214ENST00000624166 SCARA3Q6AZY7 606 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms