RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 PRUNE2Q8WUY3 3088 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 MACROD2A1Z1Q3 448 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 DRGXA6NNA5 263 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 KRT7P08729 469 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 SRFP11831 508 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 COMTP21964 271 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 L1CAMP32004 1257 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 ZNF135P52742 658 aaPredicted RBP12.9□□□□□ -0.34
LINC00963-216ENST00000623185 AMPD2Q01433 879 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 AUHQ13825 339 aaKnown RBP12.9□□□□□ -0.34
LINC00963-216ENST00000623185 DHCR24Q15392 516 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 MPPE1Q53F39 396 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 FAM133BQ5BKY9 247 aaKnown RBP12.9□□□□□ -0.34
LINC00963-216ENST00000623185 PIK3R6Q5UE93 754 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 NADSYN1Q6IA69 706 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 POLNQ7Z5Q5 900 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 DAAM2Q86T65 1068 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 CCDC185Q8N715 623 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 LRRC57Q8N9N7 239 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 DNASE1L2Q92874 299 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 EBF3Q9H4W6 596 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 ECT2Q9H8V3 914 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 LZTFL1Q9NQ48 299 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 MARK1Q9P0L2 795 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 TRIM10Q9UDY6 481 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 XPO7Q9UIA9 1087 aaKnown RBP12.9□□□□□ -0.34
LINC00963-216ENST00000623185 HS3ST4Q9Y661 456 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC00963-216ENST00000623185 DOCK8Q8NF50 2099 aa12.9□□□□□ -0.34
LINC00963-216ENST00000623185 COL6A3P12111 3177 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 OBSL1O75147 1896 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 GOLGA6L7A0A1B0GV03 622 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 GOLGA6L9A6NEM1 432 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 MOCS2O96007 188 aaPredicted RBP12.89□□□□□ -0.35
LINC00963-216ENST00000623185 CYBBP04839 570 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 RARAP10276 462 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 TACR2P21452 398 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 IL1R2P27930 398 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 SLC6A4P31645 630 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 HTR7P34969 479 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 HCAR3P49019 387 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 SLC25A11Q02978 314 aaKnown RBP12.89□□□□□ -0.35
LINC00963-216ENST00000623185 GAD2Q05329 585 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 ITPRIPL2Q3MIP1 535 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 EFHC2Q5JST6 749 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 FBXL22Q6P050 247 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 LRRC31Q6UY01 552 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 CYP4V2Q6ZWL3 525 aaPredicted RBP12.89□□□□□ -0.35
LINC00963-216ENST00000623185 TMEM25Q86YD3 366 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 RHOT1Q8IXI2 618 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 UBALD2Q8IYN6 164 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 CPA6Q8N4T0 437 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 FAM71BQ8TC56 605 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 CSGALNACT1Q8TDX6 532 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 ASIC4Q96FT7 647 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 ZFYVE19Q96K21 471 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 SIK2Q9H0K1 926 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 CD320Q9NPF0 282 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 HPS4Q9NQG7 708 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 PPARGC1AQ9UBK2 798 aaKnown RBP12.89□□□□□ -0.35
LINC00963-216ENST00000623185 WNT16Q9UBV4 365 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 DUSP12Q9UNI6 340 aa12.89□□□□□ -0.35
LINC00963-216ENST00000623185 IGLV3-10A0A075B6K4 115 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 GRID2IPA4D2P6 1211 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 OTOL1A6NHN0 477 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-216ENST00000623185 TMEM110-MUSTN1A8MSY1 372 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 F5H5T6 163 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 HOXC11O43248 304 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-216ENST00000623185 PALMO75781 387 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 MOCS3O95396 460 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 ADH1CP00326 375 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 PENKP01210 267 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-216ENST00000623185 ARSAP15289 507 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 SSR1P43307 286 aaKnown RBP12.88□□□□□ -0.35
LINC00963-216ENST00000623185 SEMA3BQ13214 749 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 PDK2Q15119 407 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 DPYSL2Q16555 572 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 SLC44A4Q53GD3 710 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 LY6G5CQ5SRR4 150 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 ARTNQ5T4W7 220 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 TTC39BQ5VTQ0 682 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-216ENST00000623185 RAP1GAP2Q684P5 730 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 TRIM68Q6AZZ1 485 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 MAP7D3Q8IWC1 876 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 ZNF683Q8IZ20 524 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 CCAR2Q8N163 923 aaKnown RBP12.88□□□□□ -0.35
LINC00963-216ENST00000623185 TRIM58Q8NG06 486 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 CD101Q93033 1021 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 TRIM44Q96DX7 344 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-216ENST00000623185 PEBP4Q96S96 227 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 SNRNP25Q9BV90 132 aaKnown RBP12.88□□□□□ -0.35
LINC00963-216ENST00000623185 SLC2A11Q9BYW1 496 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 C8orf33Q9H7E9 229 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-216ENST00000623185 TMPRSS4Q9NRS4 437 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 GTSE1Q9NYZ3 720 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 FBXO10Q9UK96 956 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 PYCARDQ9ULZ3 195 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 AP4E1Q9UPM8 1137 aa12.88□□□□□ -0.35
LINC00963-216ENST00000623185 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC00963-216ENST00000623185 MYO16Q9Y6X6 1858 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms