RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 WBP2Q969T9 261 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 BTN2A3PQ96KV6 586 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 ANLNQ9NQW6 1124 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 PCSK1NQ9UHG2 260 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 SLC12A6Q9UHW9 1150 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 LSM7Q9UK45 103 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 I6L893 689 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 PSMC3P17980 439 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 CORO1AP31146 461 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 SIGLEC14Q08ET2 396 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 GRM2Q14416 872 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 TRIM67Q6ZTA4 783 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 PEX26Q7Z412 305 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 MFSD6LQ8IWD5 586 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 TEKT4Q8WW24 435 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 HAPLN3Q96S86 360 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 STOML2Q9UJZ1 356 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 AMFRQ9UKV5 643 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 ZNF510Q9Y2H8 683 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 SH3BP1Q9Y3L3 701 aa20.56■□□□□ 0.88
PDLIM2-221ENST00000622702 PSTPIP1O43586 416 aa20.55■□□□□ 0.88
PDLIM2-221ENST00000622702 FTCDO95954 541 aa20.55■□□□□ 0.88
PDLIM2-221ENST00000622702 KRT7P08729 469 aa20.55■□□□□ 0.88
PDLIM2-221ENST00000622702 SSR1P43307 286 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-221ENST00000622702 SLC11A2P49281 568 aa20.55■□□□□ 0.88
PDLIM2-221ENST00000622702 ERMARDQ5T6L9 678 aa20.55■□□□□ 0.88
PDLIM2-221ENST00000622702 ACBD5Q5T8D3 534 aaPredicted RBP20.55■□□□□ 0.88
PDLIM2-221ENST00000622702 TXNRD3NBQ6F5E7 133 aa20.55■□□□□ 0.88
PDLIM2-221ENST00000622702 RHOT1Q8IXI2 618 aa20.55■□□□□ 0.88
PDLIM2-221ENST00000622702 LRRC3BQ96PB8 259 aa20.55■□□□□ 0.88
PDLIM2-221ENST00000622702 SNRNP25Q9BV90 132 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-221ENST00000622702 TRMT61BQ9BVS5 477 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-221ENST00000622702 FZD10Q9ULW2 581 aa20.55■□□□□ 0.88
PDLIM2-221ENST00000622702 PAGE1O75459 146 aa20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 MOCS2O96007 188 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 MSNP26038 577 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 CTNNA2P26232 953 aa20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 CTNNA1P35221 906 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 EFHC2Q5JST6 749 aa20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 ZNF569Q5MCW4 686 aa20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 DENND1CQ8IV53 801 aa20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 BPIFB1Q8TDL5 484 aa20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 DEPDC1BQ8WUY9 529 aa20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 C1orf74Q96LT6 269 aa20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 SLC2A4RGQ9NR83 387 aa20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 TMPRSS4Q9NRS4 437 aa20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 XPO7Q9UIA9 1087 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 AGO1Q9UL18 857 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-221ENST00000622702 FAM86C2PA6NEL3 165 aa20.53■□□□□ 0.88
PDLIM2-221ENST00000622702 MIF4GDA9UHW6 222 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-221ENST00000622702 ACSL4O60488 711 aa20.53■□□□□ 0.88
PDLIM2-221ENST00000622702 RARAP10276 462 aa20.53■□□□□ 0.88
PDLIM2-221ENST00000622702 GDI1P31150 447 aa20.53■□□□□ 0.88
PDLIM2-221ENST00000622702 YAF2Q8IY57 180 aa20.53■□□□□ 0.88
PDLIM2-221ENST00000622702 OSBPL2Q9H1P3 480 aa20.53■□□□□ 0.88
PDLIM2-221ENST00000622702 BRD9Q9H8M2 597 aa20.53■□□□□ 0.88
PDLIM2-221ENST00000622702 ZWILCHQ9H900 591 aa20.53■□□□□ 0.88
PDLIM2-221ENST00000622702 FBXL21Q9UKT6 434 aa20.53■□□□□ 0.88
PDLIM2-221ENST00000622702 AP4E1Q9UPM8 1137 aa20.53■□□□□ 0.88
PDLIM2-221ENST00000622702 PCDHA3Q9Y5H8 950 aa20.53■□□□□ 0.88
PDLIM2-221ENST00000622702 CCDC66A2RUB6 948 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 TMEM221A6NGB7 291 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 M0R296 226 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 MLLT6P55198 1093 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 NRG1Q02297 640 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 SMTNL2Q2TAL5 461 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 KCNT1Q5JUK3 1230 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 ADGRF1Q5T601 910 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 MEI1Q5TIA1 1274 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 PIK3R6Q5UE93 754 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 BBS7Q8IWZ6 715 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 FAM217AQ8IXS0 508 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 SLC35F6Q8N357 371 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 TTC16Q8NEE8 873 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 HES6Q96HZ4 224 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 TBC1D14Q9P2M4 693 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 JRKLQ9Y4A0 524 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 HS3ST4Q9Y661 456 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 TECTAO75443 2155 aa20.52■□□□□ 0.88
PDLIM2-221ENST00000622702 SLC9A3R1O14745 358 aaPredicted RBP20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 GNG11P61952 73 aa20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 FCHO2Q0JRZ9 810 aa20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 DPYSL2Q16555 572 aa20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 FAM133BQ5BKY9 247 aaKnown RBP20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 MS4A13Q5J8X5 152 aa20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 NADSYN1Q6IA69 706 aa20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 NYAP1Q6ZVC0 841 aa20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 KRT35Q92764 455 aa20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 OTUB2Q96DC9 234 aa20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 ASIC4Q96FT7 647 aa20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 PRMT1Q99873 361 aaKnown RBP20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 DDX50Q9BQ39 737 aaKnown RBP20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 C1QTNF1Q9BXJ1 281 aa20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 C11orf16Q9NQ32 467 aa20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 GPATCH2LQ9NWQ4 482 aa20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 DDX56Q9NY93 547 aaKnown RBP20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 WNT16Q9UBV4 365 aa20.51■□□□□ 0.87
PDLIM2-221ENST00000622702 L1CAMP32004 1257 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms