RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 TTC39BQ5VTQ0 682 aaPredicted RBP9.48□□□□□ -0.89
GGA3-223ENST00000621870 DOK6Q6PKX4 331 aa9.48□□□□□ -0.89
GGA3-223ENST00000621870 ARID3BQ8IVW6 561 aaPredicted RBP9.48□□□□□ -0.89
GGA3-223ENST00000621870 PDZD7Q9H5P4 517 aa9.48□□□□□ -0.89
GGA3-223ENST00000621870 PCDH9Q9HC56 1237 aa9.48□□□□□ -0.89
GGA3-223ENST00000621870 CREBZFQ9NS37 354 aa9.48□□□□□ -0.89
GGA3-223ENST00000621870 LNPEPQ9UIQ6 1025 aa9.48□□□□□ -0.89
GGA3-223ENST00000621870 ADAM28Q9UKQ2 775 aa9.48□□□□□ -0.89
GGA3-223ENST00000621870 LTN1O94822 1766 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 FRMD3A2A2Y4 597 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 IL1BP01584 269 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 PRKCIP41743 596 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 MMP13P45452 471 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 THOP1P52888 689 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 PLIN5Q00G26 463 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 DNAJC3Q13217 504 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 CAMK2GQ13555 558 aaPredicted RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 ANKRD20A4Q4UJ75 823 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ANKRD20A8PQ5CZ79 823 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 MIIPQ5JXC2 388 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ANKRD20A2Q5SQ80 823 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ARMC12Q5T9G4 340 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 MFSD4BQ5TF39 518 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ANKRD20A1Q5TYW2 823 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 PAPD7Q5XG87 772 aaKnown RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 FUT10Q6P4F1 479 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 OTOAQ7RTW8 1153 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 MON1AQ86VX9 555 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 NLRP14Q86W24 1093 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
GGA3-223ENST00000621870 ACTRT1Q8TDG2 376 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 GBP5Q96PP8 586 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 UBE2OQ9C0C9 1292 aaKnown RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 PRDM12Q9H4Q4 367 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ZDHHC6Q9H6R6 413 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 TBC1D13Q9NVG8 400 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 RNF112Q9ULX5 631 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 PHF20L1A8MW92 1017 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 LGR5O75473 907 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 PARNO95453 639 aaKnown RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 ERCC2P18074 760 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ARL2P36404 184 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 HSD17B3P37058 310 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 PSEN1P49768 467 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 FMO1Q01740 532 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 CSHL1Q14406 222 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ACAP1Q15027 740 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 SNCBQ16143 134 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 HIST2H2ACQ16777 129 aaPredicted RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 BMT2Q1RMZ1 405 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 HIST2H2AA3Q6FI13 130 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 MYO1HQ8N1T3 1032 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 PIP4K2CQ8TBX8 421 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 E2F7Q96AV8 911 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 MFSD14AQ96MC6 490 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 SRPK1Q96SB4 655 aaKnown RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 MYOCQ99972 504 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 CDC42EP4Q9H3Q1 356 aaKnown RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 BRD9Q9H8M2 597 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 CNGB3Q9NQW8 809 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 DRG1Q9Y295 367 aaKnown RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 NCKAP1Q9Y2A7 1128 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ACOT9Q9Y305 439 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 PCDHA3Q9Y5H8 950 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 MON2Q7Z3U7 1717 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 NALCNQ8IZF0 1738 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 MDM4O15151 490 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 PRLRP16471 622 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 KDELR1P24390 212 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 SERPINA4P29622 427 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ELK3P41970 407 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 HDAC4P56524 1084 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 PHEXP78562 749 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 MAMLD1Q13495 774 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 CHI3L2Q15782 390 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ACBD5Q5T8D3 534 aaPredicted RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 OLFML2BQ68BL8 750 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 LRRC8EQ6NSJ5 796 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 MARK2Q7KZI7 788 aaKnown RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 GAS2L1Q99501 681 aaPredicted RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 OMDQ99983 421 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ROPN1BQ9BZX4 212 aaPredicted RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 POLR1EQ9GZS1 481 aaKnown RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 PPCSQ9HAB8 311 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 ROPN1Q9HAT0 212 aaPredicted RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 CHST7Q9NS84 486 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 PSD3Q9NYI0 1048 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 FAM153AQ9UHL3 310 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 PLIN4Q96Q06 1357 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 KCPQ6ZWJ8 1503 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 IFRD1O00458 451 aaPredicted RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 TBL1XO60907 577 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 CLASP2O75122 1294 aaKnown RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 MT-CO1P00395 513 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 RPSAP08865 295 aaKnown RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 PIRTP0C851 137 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 RFX3P48380 749 aa9.47□□□□□ -0.89
GGA3-223ENST00000621870 CLK2P49760 499 aaKnown RBP9.47□□□□□ -0.89
GGA3-223ENST00000621870 NOMO3P69849 1222 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms