RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 FLCNQ8NFG4 579 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 SH3RF2Q8TEC5 729 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 IRGQQ8WZA9 623 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 FAM3CQ92520 227 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 NELL1Q92832 810 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 ACDQ96AP0 544 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 SLC2A13Q96QE2 648 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 WDR24Q96S15 920 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 CHP1Q99653 195 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 KLF16Q9BXK1 252 aaPredicted RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 RAB6CQ9H0N0 254 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 LINC00597Q9H2U6 94 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 CHRDQ9H2X0 955 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 LRRC4Q9HBW1 653 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 HPS4Q9NQG7 708 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 CNGB3Q9NQW8 809 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 ZNF446Q9NWS9 450 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 NAALADL1Q9UQQ1 740 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 CPQQ9Y646 472 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 PIAS3Q9Y6X2 628 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 ATG2BQ96BY7 2078 aa5.47□□□□□ -1.53
SHMT1-211ENST00000618902 CNOT1A5YKK6 2376 aaKnown RBP5.47□□□□□ -1.53
SHMT1-211ENST00000618902 COL4A2P08572 1712 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 A0A087X0T9 212 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 FAM86C2PA6NEL3 165 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ANTXRLA6NF34 631 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 I6L893 689 aaPredicted RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 LEFTY2O00292 366 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 GFRA2O00451 464 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 CES2O00748 559 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ATMINO43313 823 aaPredicted RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 MSI1O43347 362 aaKnown RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 OPA1O60313 960 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 FBXO21O94952 628 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 LSM8O95777 96 aaKnown RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ADH1CP00326 375 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 PDGFBP01127 241 aaPredicted RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 IGLV3-25P01717 112 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 LTFP02788 710 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 HMBSP08397 361 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 FAM228BP0C875 321 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 MBL2P11226 248 aaPredicted RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 RALAP11233 206 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 CTHP32929 405 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ATP5C1P36542 298 aaKnown RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 FLT3P36888 993 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 EIF4A3P38919 411 aaKnown RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 DPP6P42658 865 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 PAFAH1B1P43034 410 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ACADSBP45954 432 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 SLC6A3Q01959 620 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 OGDHQ02218 1023 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 CENPCQ03188 943 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 KLHL30Q0D2K2 578 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 MESP2Q0VG99 397 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 EFEMP1Q12805 493 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 TCF15Q12870 199 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 NNTQ13423 1086 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 EIF4EBP2Q13542 120 aaPredicted RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 RUNX3Q13761 415 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 CCINQ13939 588 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 NAA30Q147X3 362 aaPredicted RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 MTF1Q14872 753 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ANGPT1Q15389 498 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 EML3Q32P44 896 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 TMEM196Q5HYL7 178 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 SPDYCQ5MJ68 293 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 C10orf120Q5SQS8 335 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ALS2CLQ60I27 953 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 CWF19L1Q69YN2 538 aaKnown RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 TRIM68Q6AZZ1 485 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 OR6B2Q6IFH4 312 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 MSANTD2Q6P1R3 559 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 RAD9BQ6WBX8 426 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 Q6ZNB5 142 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 TPRG1Q6ZUI0 275 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 TOGARAM2Q6ZUX3 1019 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 HTR3DQ70Z44 454 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 SLC26A9Q7LBE3 791 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 TAC4Q86UU9 113 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ERICH1Q86X53 443 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 PHF13Q86YI8 300 aaPredicted RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 MCOLN2Q8IZK6 566 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ADGRG2Q8IZP9 1017 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 SIX6OS1Q8N1H7 587 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 TMEM105Q8N8V8 129 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 TMEM35BQ8NCS4 154 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 JOSD2Q8TAC2 188 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ADAM32Q8TC27 787 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 DQX1Q8TE96 717 aaKnown RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ATOH1Q92858 354 aaPredicted RBP5.46□□□□□ -1.54
SHMT1-211ENST00000618902 AZIN2Q96A70 460 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 MYEOVQ96EZ4 313 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 CCDC42Q96M95 316 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ALS2CR12Q96Q35 445 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 C11orf70Q9BRQ4 267 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 TRIM7Q9C029 511 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 ANLNQ9NQW6 1124 aa5.46□□□□□ -1.54
SHMT1-211ENST00000618902 PRMT8Q9NR22 394 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms