RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 PHOX2BQ99453 314 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 XPO4Q9C0E2 1151 aaKnown RBP8.57□□□□□ -1.04
NEK3-209ENST00000618856 NUCKS1Q9H1E3 243 aaKnown RBP8.57□□□□□ -1.04
NEK3-209ENST00000618856 PDCL3Q9H2J4 239 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 SEMA4AQ9H3S1 761 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 SYNCQ9H7C4 482 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 ANLNQ9NQW6 1124 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 PIGVQ9NUD9 493 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 ZSCAN32Q9NX65 697 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 ARHGEF38Q9NXL2 777 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.57□□□□□ -1.04
NEK3-209ENST00000618856 IFNKQ9P0W0 207 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 EBF1Q9UH73 591 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 XPO7Q9UIA9 1087 aaKnown RBP8.57□□□□□ -1.04
NEK3-209ENST00000618856 MMP17Q9ULZ9 603 aa8.57□□□□□ -1.04
NEK3-209ENST00000618856 GOLGA6L7A0A1B0GV03 622 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 C2CD4BA6NLJ0 364 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 SIGLEC16A6NMB1 481 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 DDX3XO00571 662 aaKnown RBP eCLIP8.56□□□□□ -1.04
NEK3-209ENST00000618856 ADAM23O75077 832 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 GRAP2O75791 330 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 F9P00740 461 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 CYBBP04839 570 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 CALB1P05937 261 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 SLC2A3P11169 496 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 TFE3P19532 575 aaPredicted RBP8.56□□□□□ -1.04
NEK3-209ENST00000618856 HOXC13P31276 330 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 CCR1P32246 355 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 GBP1P32455 592 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 PTPN9P43378 593 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 NSFP46459 744 aaKnown RBP8.56□□□□□ -1.04
NEK3-209ENST00000618856 DGKGP49619 791 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 NRLP54845 237 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 ARID5AQ03989 594 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 DMWDQ09019 674 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 EIF4HQ15056 248 aaKnown RBP8.56□□□□□ -1.04
NEK3-209ENST00000618856 GEN1Q17RS7 908 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 ZC3H12AQ5D1E8 599 aaKnown RBP8.56□□□□□ -1.04
NEK3-209ENST00000618856 BRMS1LQ5PSV4 323 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 ACBD5Q5T8D3 534 aaPredicted RBP8.56□□□□□ -1.04
NEK3-209ENST00000618856 FAM102AQ5T9C2 384 aaPredicted RBP8.56□□□□□ -1.04
NEK3-209ENST00000618856 SFMBT2Q5VUG0 894 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 TMEM215Q68D42 235 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 ACAD10Q6JQN1 1059 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 PPP1R2P3Q6NXS1 205 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 TSSK4Q6SA08 328 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 RASSF3Q86WH2 238 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 DRC7Q8IY82 874 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 C3orf20Q8ND61 904 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 RPLP0P6Q8NHW5 317 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 FIBINQ8TAL6 211 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 ATOH1Q92858 354 aaPredicted RBP8.56□□□□□ -1.04
NEK3-209ENST00000618856 ACDQ96AP0 544 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 TMA16Q96EY4 203 aaKnown RBP8.56□□□□□ -1.04
NEK3-209ENST00000618856 C1orf74Q96LT6 269 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 GABRG3Q99928 467 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 DDX50Q9BQ39 737 aaKnown RBP8.56□□□□□ -1.04
NEK3-209ENST00000618856 HAUS4Q9H6D7 363 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 DNAJC17Q9NVM6 304 aaKnown RBP8.56□□□□□ -1.04
NEK3-209ENST00000618856 DDIT4Q9NX09 232 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 PLK2Q9NYY3 685 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 ADAM22Q9P0K1 906 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 STAP1Q9ULZ2 295 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 NENFQ9UMX5 172 aa8.56□□□□□ -1.04
NEK3-209ENST00000618856 MUC22E2RYF6 1773 aaPredicted RBP8.56□□□□□ -1.04
NEK3-209ENST00000618856 A0A1W2PQF6 199 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 TBC1D3BA6NDS4 549 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 DRGXA6NNA5 263 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 M0QYT0 321 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 SGK1O00141 431 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 NPC1O15118 1278 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 AP5Z1O43299 807 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 APOEP02649 317 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 TACR2P21452 398 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 HLA-FP30511 346 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 CNR2P34972 360 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 KDSRQ06136 332 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 DMC1Q14565 340 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 ASIC2Q16515 512 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 CRY1Q16526 586 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 CCDC14Q49A88 953 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 EMC10Q5UCC4 262 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 PLEKHA7Q6IQ23 1121 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 RFWD3Q6PCD5 774 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 TMEM92Q6UXU6 159 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 NUDT18Q6ZVK8 323 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 STRADAQ7RTN6 431 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 ADIPOR2Q86V24 386 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 WDR5BQ86VZ2 330 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 LONP2Q86WA8 852 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 MCOLN2Q8IZK6 566 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 ATP6V0D2Q8N8Y2 350 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 ZNF557Q8N988 423 aaPredicted RBP8.55□□□□□ -1.04
NEK3-209ENST00000618856 SUMF1Q8NBK3 374 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 HJURPQ8NCD3 748 aaPredicted RBP8.55□□□□□ -1.04
NEK3-209ENST00000618856 JOSD2Q8TAC2 188 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 DDI1Q8WTU0 396 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 FAM122AQ96E09 287 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 TBCBQ99426 244 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 C11orf70Q9BRQ4 267 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms