RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CYP4F11Q9HBI6 524 aa21■□□□□ 0.95
NEK3-208ENST00000618534 DPP3Q9NY33 737 aa21■□□□□ 0.95
NEK3-208ENST00000618534 A6NJR5 290 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 ZNF487B1APH4 448 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 SESN2P58004 480 aaPredicted RBP20.99■□□□□ 0.95
NEK3-208ENST00000618534 IGBP1P78318 339 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 TNFAIP2Q03169 654 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 ASPHQ12797 758 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 LPCAT4Q643R3 524 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 MTHFD1LQ6UB35 978 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 CYS1Q717R9 158 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 PDSS2Q86YH6 399 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 COPS5Q92905 334 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 CSPG4P5Q96PW8 444 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 KCTD15Q96SI1 283 aaPredicted RBP20.99■□□□□ 0.95
NEK3-208ENST00000618534 MTMR10Q9NXD2 777 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 DTLQ9NZJ0 730 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 ITGA11Q9UKX5 1188 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 AP4E1Q9UPM8 1137 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 RBP5P82980 135 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 HNRNPDQ14103 355 aaKnown RBP20.99■□□□□ 0.95
NEK3-208ENST00000618534 STILQ15468 1287 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 SFT2D3Q587I9 215 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 PPM1JQ5JR12 505 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 TMEM110Q86TL2 294 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 SESTD1Q86VW0 696 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 RASSF3Q86WH2 238 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 CLEC4CQ8WTT0 213 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 MRPL45Q9BRJ2 306 aaKnown RBP20.99■□□□□ 0.95
NEK3-208ENST00000618534 IL1RAPL1Q9NZN1 696 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 ADAMTS6Q9UKP5 1117 aa20.99■□□□□ 0.95
NEK3-208ENST00000618534 MYO18AQ92614 2054 aaKnown RBP20.99■□□□□ 0.95
NEK3-208ENST00000618534 A0A087WZ62 844 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 DESP17661 470 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 MGAT1P26572 445 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 PHKA2P46019 1235 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 PEX6Q13608 980 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 NCBP2-AS2Q69YL0 99 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 PDPK2PQ6A1A2 396 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 PGM2L1Q6PCE3 622 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 PPP4R1Q8TF05 950 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 CDKL2Q92772 493 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 ATP2A3Q93084 1043 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 FDXACB1Q9BRP7 624 aaPredicted RBP20.98■□□□□ 0.95
NEK3-208ENST00000618534 DNAJC28Q9NX36 388 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 CPSF2Q9P2I0 782 aaKnown RBP20.98■□□□□ 0.95
NEK3-208ENST00000618534 E2F8A0AVK6 867 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 SOCS7O14512 581 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 PGK2P07205 417 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 ITGA2BP08514 1039 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 ZFXP17010 805 aaPredicted RBP20.98■□□□□ 0.95
NEK3-208ENST00000618534 NR2C2P49116 596 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 BSPRYQ5W0U4 402 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 ACAD11Q709F0 780 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 NETO2Q8NC67 525 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 SLC35F5Q8WV83 523 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 HTR3CQ8WXA8 447 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 SPATC1LQ9H0A9 340 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 TMEM216Q9P0N5 145 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 DCDC2Q9UHG0 476 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 CDH22Q9UJ99 828 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 NME7Q9Y5B8 376 aa20.98■□□□□ 0.95
NEK3-208ENST00000618534 A0A0A0MRY4 1105 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 ADCY6O43306 1168 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 C22orf31O95567 290 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 ARF4P18085 180 aaPredicted RBP20.97■□□□□ 0.95
NEK3-208ENST00000618534 CDK7P50613 346 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 MSLNQ13421 630 aaPredicted RBP20.97■□□□□ 0.95
NEK3-208ENST00000618534 SH3D19Q5HYK7 790 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 CFAP157Q5JU67 520 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 CCDC185Q8N715 623 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 EFCAB3Q8N7B9 438 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 HIPK4Q8NE63 616 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 ACTRT2Q8TDY3 377 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 ARNTL2Q8WYA1 636 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 AZIN2Q96A70 460 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 SPATA13Q96N96 652 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 LGMNQ99538 433 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 LPIN3Q9BQK8 851 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 ZDHHC7Q9NXF8 308 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 MORF4L1Q9UBU8 362 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 NFKBIEO00221 500 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 ZNF195O14628 629 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 HBP1O60381 514 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 PEX2P28328 305 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 EN1Q05925 392 aaPredicted RBP20.97■□□□□ 0.95
NEK3-208ENST00000618534 BTKQ06187 659 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 TFB1MQ8WVM0 346 aaKnown RBP20.97■□□□□ 0.95
NEK3-208ENST00000618534 NFKBIZQ9BYH8 718 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 RNPEPQ9H4A4 650 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 COPG2Q9UBF2 871 aa20.97■□□□□ 0.95
NEK3-208ENST00000618534 MLNP12872 115 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 NCF2P19878 526 aaPredicted RBP20.96■□□□□ 0.95
NEK3-208ENST00000618534 ITGAXP20702 1163 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 GRK2P25098 689 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 AQP4P55087 323 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 BIRC2Q13490 618 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 FAM187BQ17R55 369 aa20.96■□□□□ 0.95
NEK3-208ENST00000618534 FBXO16Q8IX29 292 aaPredicted RBP20.96■□□□□ 0.95
NEK3-208ENST00000618534 DEFB107AQ8IZN7 70 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms