RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 OLFM3Q96PB7 478 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 BRD8Q9H0E9 1235 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 GPATCH2LQ9NWQ4 482 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 OR12D3Q9UGF7 316 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 MAGED2Q9UNF1 606 aaPredicted RBP12.14□□□□□ -0.47
PDPN-211ENST00000617617 MMRN1Q13201 1228 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 COL19A1Q14993 1142 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 AFMIDQ63HM1 303 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 NCBP2-AS2Q69YL0 99 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 C8orf74Q6P047 294 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 TTC27Q6P3X3 843 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 MICAL1Q8TDZ2 1067 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 FATE1Q969F0 183 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 PPP2R3CQ969Q6 453 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 MAGOHBQ96A72 148 aaKnown RBP12.14□□□□□ -0.47
PDPN-211ENST00000617617 ZNF707Q96C28 371 aaPredicted RBP12.14□□□□□ -0.47
PDPN-211ENST00000617617 KRT12Q99456 494 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 CALN1Q9BXU9 219 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 SFXN1Q9H9B4 322 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 GDF3Q9NR23 364 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 DONSONQ9NYP3 566 aa12.14□□□□□ -0.47
PDPN-211ENST00000617617 R3HDM2Q9Y2K5 976 aaKnown RBP12.14□□□□□ -0.47
PDPN-211ENST00000617617 EEF2KO00418 725 aaKnown RBP12.13□□□□□ -0.47
PDPN-211ENST00000617617 GFRA2O00451 464 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 DYNC1I1O14576 645 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 MSI1O43347 362 aaKnown RBP12.13□□□□□ -0.47
PDPN-211ENST00000617617 EPCAMP16422 314 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 CCDC137Q6PK04 289 aaKnown RBP12.13□□□□□ -0.47
PDPN-211ENST00000617617 ADGRD2Q7Z7M1 963 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 CCHCR1Q8TD31 782 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 GCNAQ96QF7 691 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 LRRC1Q9BTT6 524 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 HEMGNQ9BXL5 484 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 STIM2Q9P246 746 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 RASAL2Q9UJF2 1139 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 ZNF510Q9Y2H8 683 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 HCFC2Q9Y5Z7 792 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 HS3ST4Q9Y661 456 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 UQCRHLA0A096LP55 91 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 BCLAF3A2AJT9 711 aaKnown RBP12.13□□□□□ -0.47
PDPN-211ENST00000617617 CFAP69A5D8W1 941 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 NCAM2O15394 837 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 GREM1O60565 184 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 MOSPD3O75425 235 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 UQCRHP07919 91 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 SPATA31D3P0C874 917 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 GOT1P17174 413 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 PTK6Q13882 451 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 ERCC6LQ2NKX8 1250 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 TEX35Q5T0J7 233 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 PIK3R6Q5UE93 754 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 Q6ZNB5 142 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 SPATA31D4Q6ZUB0 917 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 DDX42Q86XP3 938 aaKnown RBP eCLIP12.13□□□□□ -0.47
PDPN-211ENST00000617617 PYROXD2Q8N2H3 581 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 LZTR1Q8N653 840 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 EFHBQ8N7U6 833 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 MRPS31Q92665 395 aaKnown RBP12.13□□□□□ -0.47
PDPN-211ENST00000617617 TBC1D31Q96DN5 1066 aa12.13□□□□□ -0.47
PDPN-211ENST00000617617 DDX47Q9H0S4 455 aaKnown RBP12.13□□□□□ -0.47
PDPN-211ENST00000617617 SLC12A8A0AV02 714 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 ZNF197O14709 1029 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 RAD51CO43502 376 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 TPI1P60174 286 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 DR1Q01658 176 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 CBLBQ13191 982 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 BYSLQ13895 437 aaKnown RBP12.12□□□□□ -0.47
PDPN-211ENST00000617617 MS4A13Q5J8X5 152 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 ZFYVE27Q5T4F4 411 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 RNF43Q68DV7 783 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 PDZD4Q76G19 769 aaPredicted RBP12.12□□□□□ -0.47
PDPN-211ENST00000617617 ALLCQ8N6M5 410 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 GDPD5Q8WTR4 605 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 ARNTL2Q8WYA1 636 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 DOCK6Q96HP0 2047 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 KLC2Q9H0B6 622 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 RNF38Q9H0F5 515 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 RAB17Q9H0T7 212 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 NSUN3Q9H649 340 aaKnown RBP12.12□□□□□ -0.47
PDPN-211ENST00000617617 CATSPERBQ9H7T0 1116 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 TLE6Q9H808 572 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 DNMT3BQ9UBC3 853 aaKnown RBP12.12□□□□□ -0.47
PDPN-211ENST00000617617 FAM72CH0Y354 149 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 NDC80O14777 642 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 STC2O76061 302 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 LRIG2O94898 1065 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 TBX18O95935 607 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 GABRR2P28476 465 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 CA8P35219 290 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 OTUD4Q01804 1114 aaKnown RBP12.12□□□□□ -0.47
PDPN-211ENST00000617617 PPP6R3Q5H9R7 873 aaPredicted RBP12.12□□□□□ -0.47
PDPN-211ENST00000617617 FAM72AQ5TYM5 149 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 FAM72DQ6L9T8 149 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 NLRP14Q86W24 1093 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 FAM72BQ86X60 149 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 LRRC49Q8IUZ0 686 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 HS6ST3Q8IZP7 471 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 SHKBP1Q8TBC3 707 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 ACTL9Q8TC94 416 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms