RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 ACO1P21399 889 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 CXCL12P48061 93 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 SNAP47Q5SQN1 464 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 C10orf76Q5T2E6 689 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 TPGS2Q68CL5 300 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 TICAM1Q8IUC6 712 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CEP95Q96GE4 821 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 FEM1CQ96JP0 617 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 EBNA1BP2Q99848 306 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 COL6A1P12109 1028 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 RPL9P32969 192 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 TOB1P50616 345 aaPredicted RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 RFX8Q6ZV50 586 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 MARK2Q7KZI7 788 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 ZNF605Q86T29 641 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 TMEM35BQ8NCS4 154 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 NDC1Q9BTX1 674 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 FAIMQ9NVQ4 179 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 MARK1Q9P0L2 795 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 VPS18Q9P253 973 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 TRIM64A6NGJ6 449 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 KPNA7A9QM74 516 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CLEC3AO75596 197 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ME2P23368 584 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 LIG3P49916 1009 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 PDCD2Q16342 344 aaPredicted RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 GRIK5Q16478 980 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 HSF5Q4G112 596 aaPredicted RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 MRPL50Q8N5N7 158 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 EPS8L1Q8TE68 723 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 SUCLG2Q96I99 432 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 LRGUKQ96M69 825 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 PLA2G12BQ9BX93 195 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 COL2A1P02458 1487 aaPredicted RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 SYN3O14994 580 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 GOLGA7BQ2TAP0 167 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 FBXO47Q5MNV8 452 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 LIX1LQ8IVB5 337 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 LMNTD2Q8IXW0 634 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 IFT20Q8IY31 132 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 DNAJB3Q8WWF6 145 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 KRT84Q9NSB2 600 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 TRIP12Q14669 1992 aaPredicted RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 FAM171A2A8MVW0 826 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 GFPT2O94808 682 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 GSTT2P0CG29 244 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 GSTT2BP0CG30 244 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 TNFRSF4P43489 277 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 BIKQ13323 160 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 SFMBT2Q5VUG0 894 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CYP20A1Q6UW02 462 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 TMEM192Q8IY95 271 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ADGRF4Q8IZF3 695 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 HMGB4Q8WW32 186 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 GJA10Q969M2 543 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 GFM1Q96RP9 751 aaKnown RBP3.45□□□□□ -1.86
LPP-220ENST00000617246 MIEF1Q9NQG6 463 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 AMFRQ9UKV5 643 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 ARID2Q68CP9 1835 aa3.45□□□□□ -1.86
LPP-220ENST00000617246 CPED1A4D0V7 1026 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 GNGT2O14610 69 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 KRT16P08779 473 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 NEK5Q6P3R8 708 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 PEG10Q86TG7 708 aaKnown RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 CALML6Q8TD86 181 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 TRIM15Q9C019 465 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 PRDM12Q9H4Q4 367 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 FAM96AQ9H5X1 160 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 CYP39A1Q9NYL5 469 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 PACSIN2Q9UNF0 486 aaPredicted RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 HYKKA2RU49 373 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 C2orf71A6NGG8 1288 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ARHGAP6O43182 974 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 DPM1O60762 260 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 AGFG2O95081 481 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 IFNA16P05015 189 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 CYP2C18P33260 490 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 COPZ1P61923 177 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 UBXN1Q04323 297 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 CARTPTQ16568 116 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 TIGD6Q17RP2 521 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ARMCX6Q7L4S7 300 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ABHD12BQ7Z5M8 362 aaPredicted RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 SIX5Q8N196 739 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 XXYLT1Q8NBI6 393 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 MOSPD2Q8NHP6 518 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 MRM3Q9HC36 420 aaKnown RBP3.44□□□□□ -1.86
LPP-220ENST00000617246 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.44□□□□□ -1.86
LPP-220ENST00000617246 PODXLO00592 558 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 GSTA4O15217 222 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 COX6B1P14854 86 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 ITGA3P26006 1051 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 CCR1P32246 355 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 MLH1P40692 756 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 DGKGP49619 791 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 KRT31Q15323 416 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 TAF8Q7Z7C8 310 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 LINC00523Q86TU6 105 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 TMEM126BQ8IUX1 230 aa3.44□□□□□ -1.86
LPP-220ENST00000617246 COG1Q8WTW3 980 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms