RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 STOML2Q9UJZ1 356 aa16.18■□□□□ 0.18
PCDHGC3-204ENST00000617222 FZD10Q9ULW2 581 aa16.18■□□□□ 0.18
PCDHGC3-204ENST00000617222 HS3ST4Q9Y661 456 aa16.18■□□□□ 0.18
PCDHGC3-204ENST00000617222 XIRP2A4UGR9 3374 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 GRID2IPA4D2P6 1211 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 NARSO43776 548 aaKnown RBP16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 SPOPO43791 374 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 TSPAN3O60637 253 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 PALMO75781 387 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 TNNT1P13805 278 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 TACR2P21452 398 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 SLC6A4P31645 630 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 CHKAP35790 457 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 GGCXP38435 758 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 VCPP55072 806 aaKnown RBP16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 MLLT6P55198 1093 aaPredicted RBP16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 SLC25A11Q02978 314 aaKnown RBP16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 HADHQ16836 314 aaKnown RBP16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 BOLA3Q53S33 107 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 FAM133BQ5BKY9 247 aaKnown RBP16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 ERMARDQ5T6L9 678 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 TXNRD3NBQ6F5E7 133 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 C11orf63Q6NUN7 778 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 TPGS1Q6ZTW0 290 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 CYP4V2Q6ZWL3 525 aaPredicted RBP16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 C14orf80Q86SX3 495 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 FAM217AQ8IXS0 508 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 CPXM2Q8N436 756 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 TTC8Q8TAM2 541 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 KIAA1524Q8TCG1 905 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 IRF7Q92985 503 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 CD320Q9NPF0 282 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 HPS4Q9NQG7 708 aa16.17■□□□□ 0.18
PCDHGC3-204ENST00000617222 NFATC1O95644 943 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 RARAP10276 462 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 GJC1P36383 396 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 AIF1P55008 147 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 SCAPQ12770 1279 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 RUNX3Q13761 415 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 AUHQ13825 339 aaKnown RBP16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 DHCR24Q15392 516 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 CA9Q16790 459 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 SMTNL2Q2TAL5 461 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 EFHC2Q5JST6 749 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 KCNT1Q5JUK3 1230 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 LY6G5CQ5SRR4 150 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 FBXL22Q6P050 247 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 RHBDF2Q6PJF5 856 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 TMEM25Q86YD3 366 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 LGI2Q8N0V4 545 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 CCAR2Q8N163 923 aaKnown RBP16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 PYROXD2Q8N2H3 581 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 LRRC57Q8N9N7 239 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 HSPH1Q92598 858 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 ATP2A3Q93084 1043 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 TRIM44Q96DX7 344 aaPredicted RBP16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 TMA16Q96EY4 203 aaKnown RBP16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 MYEOVQ96EZ4 313 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 C1orf74Q96LT6 269 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 PRMT1Q99873 361 aaKnown RBP16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 SNRNP25Q9BV90 132 aaKnown RBP16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 OSBPL2Q9H1P3 480 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 SPHK2Q9NRA0 654 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 GTSE1Q9NYZ3 720 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 AP4E1Q9UPM8 1137 aa16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 TCF20Q9UGU0 1960 aaKnown RBP16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 NUP210Q8TEM1 1887 aaPredicted RBP16.16■□□□□ 0.18
PCDHGC3-204ENST00000617222 OTOL1A6NHN0 477 aaPredicted RBP16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 USP27XA6NNY8 438 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 F5H5T6 163 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 ARNTLO00327 626 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 SRGAP2O75044 1071 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 CYP17A1P05093 508 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 SRFP11831 508 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 ANO4Q32M45 955 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 ATP13A4Q4VNC1 1196 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 CPA6Q8N4T0 437 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 CSGALNACT1Q8TDX6 532 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 BHMTQ93088 406 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 DHX35Q9H5Z1 703 aaKnown RBP16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 ECT2Q9H8V3 914 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 OR12D3Q9UGF7 316 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 VANGL2Q9ULK5 521 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 SORCS3Q9UPU3 1222 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 CAPN6Q9Y6Q1 641 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 COL6A3P12111 3177 aa16.15■□□□□ 0.18
PCDHGC3-204ENST00000617222 FAM72CH0Y354 149 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 GFRA2O00451 464 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 ADH1CP00326 375 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 CYBBP04839 570 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 SGSHP51688 502 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 NR1H3Q13133 447 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 ITPRIPL2Q3MIP1 535 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 MPPE1Q53F39 396 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 HS1BP3Q53T59 392 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 ZFYVE27Q5T4F4 411 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 ACBD5Q5T8D3 534 aaPredicted RBP16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 FAM72AQ5TYM5 149 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 FAM72DQ6L9T8 149 aa16.14■□□□□ 0.17
PCDHGC3-204ENST00000617222 LRRC31Q6UY01 552 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms