RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 DCP1BQ8IZD4 617 aaKnown RBP10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 C8orf59Q8N0T1 100 aaPredicted RBP10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 RBM46Q8TBY0 533 aaKnown RBP10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 HTR3CQ8WXA8 447 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 SPRTNQ9H040 489 aaPredicted RBP10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 ITM2BQ9Y287 266 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 SNPHO15079 494 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 KRT6BP04259 564 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 VAV1P15498 845 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 TSHRP16473 764 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 MSH3P20585 1137 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 YY1P25490 414 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 KRT6CP48668 564 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 AADACL2Q6P093 401 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 FASTKD5Q7L8L6 764 aaKnown RBP10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 FAM126BQ8IXS8 530 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 ZNF513Q8N8E2 541 aaPredicted RBP10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 BAP1Q92560 729 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 GINS4Q9BRT9 223 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 PRRG3Q9BZD7 231 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 RGS18Q9NS28 235 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 CHKBQ9Y259 395 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 ERI2A8K979 691 aaKnown RBP10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 GLP2RO95838 553 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 GH1P01241 217 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 ICAM1P05362 532 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 ZSCAN5DPP0CG00 497 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 ETS2P15036 469 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 TKTP29401 623 aaKnown RBP10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 NR2C2P49116 596 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 NPY2RP49146 381 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 HK2P52789 917 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 ILF2Q12905 390 aaKnown RBP10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 ARCQ7LC44 396 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 HS6ST3Q8IZP7 471 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 MYO1HQ8N1T3 1032 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 SFRP1Q8N474 314 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 PCDH20Q8N6Y1 951 aaKnown RBP10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 OR7A2PQ8NGA2 310 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 OR6J1Q8NGC5 347 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 CAPSLQ8WWF8 208 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 PLEKHG4BQ96PX9 1271 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 CINPQ9BW66 212 aaPredicted RBP10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 DPY30Q9C005 99 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 ANAPC2Q9UJX6 822 aa10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 LSM7Q9UK45 103 aaKnown RBP10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.9□□□□□ -0.66
CLTCL1-209ENST00000617103 FAM25AB3EWG3 89 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 FAM25CB3EWG5 89 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 FAM25GB3EWG6 89 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 PSMD12O00232 456 aaPredicted RBP10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 EPHB6O15197 1021 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 COX4I1P13073 169 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 MZF1P28698 734 aaPredicted RBP10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 LRPAP1P30533 357 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 PPATQ06203 517 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 TOP3AQ13472 1001 aaPredicted RBP10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 TAB1Q15750 504 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 PGS1Q32NB8 556 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 TIMM50Q3ZCQ8 353 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 C16orf46Q6P387 395 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 NOTUMQ6P988 496 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 CYP4Z1Q86W10 505 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 ULK2Q8IYT8 1036 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 ATP6V0D2Q8N8Y2 350 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 FAM13CQ8NE31 585 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 ITFG1Q8TB96 612 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 OTUD5Q96G74 571 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 POLR1BQ9H9Y6 1135 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 DUSP12Q9UNI6 340 aa10.9□□□□□ -0.67
CLTCL1-209ENST00000617103 NEXMIFQ5QGS0 1516 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 CCDC154A6NI56 674 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 PLA2G6O60733 806 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 ANXA11P50995 505 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 FOLH1Q04609 750 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 ACAP1Q15027 740 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 BROXQ5VW32 411 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 TRPC4APQ8TEL6 797 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 PNPLA3Q9NST1 481 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 ENOPH1Q9UHY7 261 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 TMCO1Q9UM00 188 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 REXO2Q9Y3B8 237 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 VPS4BO75351 444 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 NPTXRO95502 500 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 FGFR2P21802 821 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 FGFR3P22607 806 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 JAK1P23458 1154 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 CWF19L1Q69YN2 538 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 TYW3Q6IPR3 259 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 ABRAXAS1Q6UWZ7 409 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 LRRC55Q6ZSA7 311 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 C11orf74Q86VG3 221 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 EPS8L1Q8TE68 723 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 UBASH3BQ8TF42 649 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 GIPC3Q8TF64 312 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 KAT2BQ92831 832 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 FAM136AQ96C01 138 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 ZNF512Q96ME7 567 aaPredicted RBP10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 PRKD2Q9BZL6 878 aa10.89□□□□□ -0.67
CLTCL1-209ENST00000617103 TRIM8Q9BZR9 551 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms