RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 SLC26A9Q7LBE3 791 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 APTXQ7Z2E3 356 aaKnown RBP23.01■■□□□ 1.27
CBWD3-212ENST00000616550 C11orf74Q86VG3 221 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 DHX40Q8IX18 779 aaKnown RBP23.01■■□□□ 1.27
CBWD3-212ENST00000616550 RNF34Q969K3 372 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 LOXL4Q96JB6 756 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 ZC3H10Q96K80 434 aaKnown RBP23.01■■□□□ 1.27
CBWD3-212ENST00000616550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.01■■□□□ 1.27
CBWD3-212ENST00000616550 ELOVL2Q9NXB9 296 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 INVSQ9Y283 1065 aa23.01■■□□□ 1.27
CBWD3-212ENST00000616550 DCLK1O15075 740 aa23■■□□□ 1.27
CBWD3-212ENST00000616550 RHOBTB1O94844 696 aa23■■□□□ 1.27
CBWD3-212ENST00000616550 SGSHP51688 502 aa23■■□□□ 1.27
CBWD3-212ENST00000616550 PITX1P78337 314 aaPredicted RBP23■■□□□ 1.27
CBWD3-212ENST00000616550 EIF4HQ15056 248 aaKnown RBP23■■□□□ 1.27
CBWD3-212ENST00000616550 ELF2Q15723 593 aa23■■□□□ 1.27
CBWD3-212ENST00000616550 ATP6V0D2Q8N8Y2 350 aa23■■□□□ 1.27
CBWD3-212ENST00000616550 HJURPQ8NCD3 748 aaPredicted RBP23■■□□□ 1.27
CBWD3-212ENST00000616550 ZNF397Q8NF99 534 aaPredicted RBP23■■□□□ 1.27
CBWD3-212ENST00000616550 BTN2A3PQ96KV6 586 aa23■■□□□ 1.27
CBWD3-212ENST00000616550 GABRG3Q99928 467 aa23■■□□□ 1.27
CBWD3-212ENST00000616550 CIPCQ9C0C6 399 aa23■■□□□ 1.27
CBWD3-212ENST00000616550 DDIT4Q9NX09 232 aa23■■□□□ 1.27
CBWD3-212ENST00000616550 CACNA2D2Q9NY47 1150 aa23■■□□□ 1.27
CBWD3-212ENST00000616550 STIM2Q9P246 746 aa23■■□□□ 1.27
CBWD3-212ENST00000616550 THAP10Q9P2Z0 257 aaPredicted RBP23■■□□□ 1.27
CBWD3-212ENST00000616550 USP18Q9UMW8 372 aa23■■□□□ 1.27
CBWD3-212ENST00000616550 GVINP1Q7Z2Y8 2422 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 SYNJ2BP-COX16A0A087WUM0 186 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 DAB1O75553 588 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 CCR1P32246 355 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 NOS2P35228 1153 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 GABRB2P47870 512 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 RNASE9P60153 205 aaKnown RBP22.99■■□□□ 1.27
CBWD3-212ENST00000616550 CDR2Q01850 454 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 SPEM2Q0P670 501 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 BYSLQ13895 437 aaKnown RBP22.99■■□□□ 1.27
CBWD3-212ENST00000616550 PLK5Q496M5 336 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 CCDC117Q8IWD4 279 aaPredicted RBP22.99■■□□□ 1.27
CBWD3-212ENST00000616550 ZNF557Q8N988 423 aaPredicted RBP22.99■■□□□ 1.27
CBWD3-212ENST00000616550 WFIKKN2Q8TEU8 576 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 CPA5Q8WXQ8 436 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 NUCKS1Q9H1E3 243 aaKnown RBP22.99■■□□□ 1.27
CBWD3-212ENST00000616550 ABCB8Q9NUT2 735 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 COX16Q9P0S2 106 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 NOCTQ9UK39 431 aaKnown RBP22.99■■□□□ 1.27
CBWD3-212ENST00000616550 STON1Q9Y6Q2 735 aa22.99■■□□□ 1.27
CBWD3-212ENST00000616550 A0A1W2PQF6 199 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 WASH3PC4AMC7 463 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 LRP3O75074 770 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 ABCB4P21439 1286 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 HLA-FP30511 346 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 MATKP42679 507 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 EIF4EBP2Q13542 120 aaPredicted RBP22.98■■□□□ 1.27
CBWD3-212ENST00000616550 FILIP1LQ4L180 1135 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 MS4A13Q5J8X5 152 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 NAA35Q5VZE5 725 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 MFN1Q8IWA4 741 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 ABCA7Q8IZY2 2146 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 OLIG1Q8TAK6 271 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 SLC20A1Q8WUM9 679 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 SPACA7Q96KW9 195 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 FUCA2Q9BTY2 467 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 DUSP15Q9H1R2 295 aaPredicted RBP22.98■■□□□ 1.27
CBWD3-212ENST00000616550 RRN3Q9NYV6 651 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.98■■□□□ 1.27
CBWD3-212ENST00000616550 XPO7Q9UIA9 1087 aaKnown RBP22.98■■□□□ 1.27
CBWD3-212ENST00000616550 GGA2Q9UJY4 613 aa22.98■■□□□ 1.27
CBWD3-212ENST00000616550 SYCE3A1L190 88 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 KCNU1A8MYU2 1149 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 PABPC1P11940 636 aaKnown RBP22.97■■□□□ 1.27
CBWD3-212ENST00000616550 GABRG2P18507 467 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 SCNN1AP37088 669 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 RPS24P62847 133 aaKnown RBP22.97■■□□□ 1.27
CBWD3-212ENST00000616550 NOMO3P69849 1222 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 NME3Q13232 169 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 STARD3Q14849 445 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 FAM102AQ5T9C2 384 aaPredicted RBP22.97■■□□□ 1.27
CBWD3-212ENST00000616550 RAP1GAP2Q684P5 730 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 TMEM215Q68D42 235 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 CHST9Q7L1S5 443 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 CHSY1Q86X52 802 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 XYLT1Q86Y38 959 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 LGI2Q8N0V4 545 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 AHI1Q8N157 1196 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 RLN3Q8WXF3 142 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 PRICKLE1Q96MT3 831 aaPredicted RBP22.97■■□□□ 1.27
CBWD3-212ENST00000616550 STAP1Q9ULZ2 295 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 PLA2G4CQ9UP65 541 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 RAD54BQ9Y620 910 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 THADAQ6YHU6 1953 aa22.97■■□□□ 1.27
CBWD3-212ENST00000616550 FAM170AA1A519 330 aa22.96■■□□□ 1.27
CBWD3-212ENST00000616550 M0QYT0 321 aa22.96■■□□□ 1.27
CBWD3-212ENST00000616550 TACR2P21452 398 aa22.96■■□□□ 1.27
CBWD3-212ENST00000616550 IL12RB1P42701 662 aa22.96■■□□□ 1.27
CBWD3-212ENST00000616550 FMO1Q01740 532 aa22.96■■□□□ 1.27
CBWD3-212ENST00000616550 MTA1Q13330 715 aa22.96■■□□□ 1.27
CBWD3-212ENST00000616550 ZNF234Q14588 700 aa22.96■■□□□ 1.27
CBWD3-212ENST00000616550 RNF43Q68DV7 783 aa22.96■■□□□ 1.27
CBWD3-212ENST00000616550 KIAA1211LQ6NV74 962 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms