RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 CAMK2GQ13555 558 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 HNRNPDQ14103 355 aaKnown RBP21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 FNDC3BQ53EP0 1204 aaKnown RBP21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 PMF1Q6P1K2 205 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 MSANTD2Q6P1R3 559 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 CHST9Q7L1S5 443 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 ADIPOR2Q86V24 386 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 FAM124AQ86V42 546 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 ZNF366Q8N895 744 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 OR2T3Q8NH03 318 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 WFIKKN2Q8TEU8 576 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 SLC35F5Q8WV83 523 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 KAT5Q92993 513 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 NT5C1BQ96P26 610 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 ZSWIM1Q9BR11 485 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 NUP58Q9BVL2 599 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 ZDHHC5Q9C0B5 715 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 TMEM245Q9H330 911 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 METTL14Q9HCE5 456 aaKnown RBP21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 ABCB8Q9NUT2 735 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 PCDHB4Q9Y5E5 795 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 DMXL2Q8TDJ6 3036 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 H0Y626 953 aa21.64■■□□□ 1.05
TRAPPC3-208ENST00000616074 RNF225M0QZC1 329 aaPredicted RBP21.64■■□□□ 1.05
TRAPPC3-208ENST00000616074 TRIM16O95361 564 aa21.64■■□□□ 1.05
TRAPPC3-208ENST00000616074 PTPRNQ16849 979 aa21.64■■□□□ 1.05
TRAPPC3-208ENST00000616074 ISM2Q6H9L7 571 aa21.64■■□□□ 1.05
TRAPPC3-208ENST00000616074 KIAA0907Q7Z7F0 614 aaPredicted RBP21.64■■□□□ 1.05
TRAPPC3-208ENST00000616074 NAXDQ8IW45 347 aa21.64■■□□□ 1.05
TRAPPC3-208ENST00000616074 AHI1Q8N157 1196 aa21.64■■□□□ 1.05
TRAPPC3-208ENST00000616074 CHCHD4Q8N4Q1 142 aa21.64■■□□□ 1.05
TRAPPC3-208ENST00000616074 WFDC5Q8TCV5 224 aa21.64■■□□□ 1.05
TRAPPC3-208ENST00000616074 CLEC4CQ8WTT0 213 aa21.64■■□□□ 1.05
TRAPPC3-208ENST00000616074 GGA2Q9UJY4 613 aa21.64■■□□□ 1.05
TRAPPC3-208ENST00000616074 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.64■■□□□ 1.05
TRAPPC3-208ENST00000616074 FREM2Q5SZK8 3169 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 GOLGA6L7A0A1B0GV03 622 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 M0QYV0 167 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 PSMA7O14818 248 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 BCAT2O15382 392 aaPredicted RBP21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 CALCAP01258 141 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 IGLV3-27P01718 113 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 PABPC1P11940 636 aaKnown RBP21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 CD44P16070 742 aaKnown RBP21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 BRD2P25440 801 aaKnown RBP21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 RDXP35241 583 aaKnown RBP21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 TRIP6Q15654 476 aaKnown RBP21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 RFWD3Q6PCD5 774 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 PPM1KQ8N3J5 372 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 ZCCHC14Q8WYQ9 949 aaKnown RBP21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 IRGQQ8WZA9 623 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 CEP63Q96MT8 703 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 TIGD1Q96MW7 591 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 GTPBP4Q9BZE4 634 aaKnown RBP21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 LHX5Q9H2C1 402 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 IL21RQ9HBE5 538 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 EIF2B4Q9UI10 523 aaKnown RBP21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 PLA2G4CQ9UP65 541 aa21.63■■□□□ 1.05
TRAPPC3-208ENST00000616074 PMM2O15305 246 aa21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 SLC6A4P31645 630 aa21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 BNC1Q01954 994 aa21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 STIM1Q13586 685 aa21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 CNGA2Q16280 664 aa21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 ZNF423Q2M1K9 1284 aa21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 CCDC40Q4G0X9 1142 aa21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 FAM133BQ5BKY9 247 aaKnown RBP21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 PIK3R6Q5UE93 754 aa21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 MBLAC2Q68D91 279 aa21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 RAB44Q7Z6P3 723 aaPredicted RBP21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 LMO3Q8TAP4 145 aa21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 DHTKD1Q96HY7 919 aaPredicted RBP21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 PCDHB9Q9Y5E1 797 aa21.62■■□□□ 1.05
TRAPPC3-208ENST00000616074 FAM208BQ5VWN6 2430 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 TMEM131Q92545 1883 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 TBL1XO60907 577 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 LTFP02788 710 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 C7P10643 843 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 CD70P32970 193 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 ACSL1P33121 698 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 NUGGCQ68CJ6 796 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 C1orf216Q8TAB5 229 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 SNX19Q92543 992 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 C6orf106Q9H6K1 298 aaPredicted RBP21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 GAREM1Q9H706 876 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 PRSS16Q9NQE7 514 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 HOOK1Q9UJC3 728 aaKnown RBP21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 MAN1B1Q9UKM7 699 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 SLCO1B1Q9Y6L6 691 aa21.61■■□□□ 1.05
TRAPPC3-208ENST00000616074 FAM221BA6H8Z2 402 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 SRRM3A6NNA2 597 aaPredicted RBP21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 ACSL4O60488 711 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 DLDP09622 509 aaKnown RBP21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 FTH1P19P0C7X4 201 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 SLC11A2P49281 568 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 TBX4P57082 545 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 RING1Q06587 406 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 STILQ15468 1287 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 MPP7Q5T2T1 576 aa21.6■■□□□ 1.05
TRAPPC3-208ENST00000616074 NADSYN1Q6IA69 706 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms