RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ZYG11BQ9C0D3 744 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 SYTL2Q9HCH5 934 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 ARL5CA6NH57 179 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 TLR5O60602 858 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 RARAP10276 462 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 SERPINA4P29622 427 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 SMAD3P84022 425 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 PKN2Q16513 984 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 LNX1Q8TBB1 728 aaPredicted RBP9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 SKA1Q96BD8 255 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 SRPK1Q96SB4 655 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 C1QTNF7Q9BXJ2 289 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 L2HGDHQ9H9P8 463 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 IARS2Q9NSE4 1012 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 CLDN5O00501 218 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 H2AFYO75367 372 aaKnown RBP9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 STMN1P16949 149 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 FPGSQ05932 587 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 BRMS1LQ5PSV4 323 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 ARMC12Q5T9G4 340 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 LCLAT1Q6UWP7 414 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 FGFBP2Q9BYJ0 223 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 MFSD1Q9H3U5 465 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 ACP6Q9NPH0 428 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 UBP1Q9NZI7 540 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 NCANO14594 1321 aa9.69□□□□□ -0.86
CLTCL1-208ENST00000615606 GLRA3O75311 464 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 CILPO75339 1184 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 GABRR2P28476 465 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 NUMBP49757 651 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 AIF1P55008 147 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 POU4F1Q01851 419 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 MGAT5Q09328 741 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 INTS6LQ5JSJ4 861 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 TMCO4Q5TGY1 634 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 NLRP14Q86W24 1093 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 C12orf29Q8N999 325 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 C1orf127Q8N9H9 656 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 CCDC126Q96EE4 140 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 RIC8BQ9NVN3 520 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 RNF186Q9NXI6 227 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 TAS2R14Q9NYV8 317 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 CHUKO15111 745 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 ARIH2O95376 493 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 TYMPP19971 482 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 GCKP35557 465 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 CSE1LP55060 971 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 DUSP4Q13115 394 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 DENND1CQ8IV53 801 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 MYCBPAPQ8TBZ2 947 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 PCDHGC5Q9Y5F6 944 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 ZSCAN5CA6NGD5 496 aaPredicted RBP9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 BTNL10A8MVZ5 291 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 KPNA3O00505 521 aaPredicted RBP9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 DNALI1O14645 258 aaPredicted RBP9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 CALCAP01258 141 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 CCND3P30281 292 aaPredicted RBP9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 OR2W6PQ8NHA6 318 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 SLC26A7Q8TE54 656 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 SEMA4DQ92854 862 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 FAXDC2Q96IV6 333 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 ACBD6Q9BR61 282 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 SNRNP25Q9BV90 132 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 FRMD3A2A2Y4 597 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 KCNK1O00180 336 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 EPHB6O15197 1021 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 CLASP2O75122 1294 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 CLCNKBP51801 687 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 GJA9P57773 515 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 SNRPD1P62314 119 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 MPP3Q13368 585 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 SDHAF4Q5VUM1 108 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 RBM23Q86U06 439 aaKnown RBP9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 ZBTB10Q96DT7 871 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 SPDL1Q96EA4 605 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 KLF6Q99612 283 aaPredicted RBP9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 DCDC2Q9UHG0 476 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 ANGPTL2Q9UKU9 493 aa9.68□□□□□ -0.86
CLTCL1-208ENST00000615606 ERI2A8K979 691 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 M0R2N6 131 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 O00370 1275 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 CHN1P15882 459 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 KCNA4P22459 653 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 HNRNPH3P31942 346 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 HSD17B3P37058 310 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 ZNF618Q5T7W0 954 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 WDR93Q6P2C0 686 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 POLNQ7Z5Q5 900 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 PRUNE1Q86TP1 453 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 CCDC124Q96CT7 223 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 ZIM3Q96PE6 472 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 TBL1YQ9BQ87 522 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 TLR10Q9BXR5 811 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 ASPSCR1Q9BZE9 553 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 TCP11X1B4DZS4 312 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 DHX15O43143 795 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 TBL1XO60907 577 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 MSH3P20585 1137 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 PPP3CCP48454 512 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms