RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SGSM3Q96HU1 749 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 SERAC1Q96JX3 654 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 BBS2Q9BXC9 721 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 DDX47Q9H0S4 455 aaKnown RBP9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 RNPEPQ9H4A4 650 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 RGPD1P0DJD0 1748 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 SLCO1B7G3V0H7 640 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 ACDQ96AP0 544 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 MRPL48Q96GC5 212 aaKnown RBP9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 ACBD6Q9BR61 282 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 TKTL2Q9H0I9 626 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 PPARGC1AQ9UBK2 798 aaKnown RBP9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 TUBGCP4Q9UGJ1 667 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 FBXL5Q9UKA1 691 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 USP20Q9Y2K6 914 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 CNTNAP1P78357 1384 aa9.99□□□□□ -0.81
TNFRSF9-204ENST00000615230 CLDN11O75508 207 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 PRNPP04156 253 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 ERVK-21P61565 698 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 PPP2R2AP63151 447 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 SLC7A5Q01650 507 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 SMTNL2Q2TAL5 461 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 CCDC138Q96M89 665 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 PARD6BQ9BYG5 372 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 TRABDQ9H4I3 376 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 DEC1Q9P2X7 70 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 ZFP69BQ9UJL9 534 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 NID2Q14112 1375 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 WDR91A4D1P6 747 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 EVPLLA8MZ36 301 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 VPS4BO75351 444 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 PGAM1P18669 254 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 JAK1P23458 1154 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 CRABP2P29373 138 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 RXRGP48443 463 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 GNA13Q14344 377 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 SUZ12Q15022 739 aaKnown RBP9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 GRTP1Q5TC63 336 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 PDPK2PQ6A1A2 396 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 BCAS4Q8TDM0 211 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 ARNTL2Q8WYA1 636 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 ZFP14Q9HCL3 533 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 PLAGL2Q9UPG8 496 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 PDZK1P1A8MUH7 402 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 AKAP3O75969 853 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 PLEKP08567 350 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 IL10P22301 178 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 PBLDP30039 288 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 KCNK10P57789 538 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 MPP3Q13368 585 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 NT5DC1Q5TFE4 455 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 ZCCHC8Q6NZY4 707 aaKnown RBP9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 TAGAPQ8N103 731 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 TADA1Q96BN2 335 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 CXorf40BQ96DE9 158 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 THAP2Q9H0W7 228 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 SMPD4Q9NXE4 827 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 HAUS5O94927 633 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 DGKAP23743 735 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 MAGEA4P43358 317 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 ESRRGP62508 458 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 XRCC4Q13426 336 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 INTS6LQ5JSJ4 861 aaKnown RBP9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 ZFP42Q96MM3 310 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 RBPJLQ9UBG7 517 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 TSR3Q9UJK0 312 aaKnown RBP9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 ALS2Q96Q42 1657 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 CCDC189A1A4V9 331 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 MEFVO15553 781 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 CYTH3O43739 400 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 PRLRP16471 622 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 AMD1P17707 334 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 ARL2P36404 184 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 GUCA1AP43080 201 aaPredicted RBP9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 SOX10P56693 466 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 KHDRBS2Q5VWX1 349 aaKnown RBP9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 FAM131BQ86XD5 332 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 JAMLQ86YT9 394 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 BHMTQ93088 406 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 ST6GALNAC4Q9H4F1 302 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 NMRAL1Q9HBL8 299 aa9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 DUS2Q9NX74 493 aaKnown RBP9.98□□□□□ -0.81
TNFRSF9-204ENST00000615230 RGPD8O14715 1765 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 A0A087X1B8 175 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 TADA3O75528 432 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 KLHL2O95198 593 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 WARSP23381 471 aaKnown RBP9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 TKTP29401 623 aaKnown RBP9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 RANBP1P43487 201 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 STX3Q13277 289 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 AGBL2Q5U5Z8 902 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 LRRC38Q5VT99 294 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 ILDR2Q71H61 639 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 FAM35AQ86V20 835 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 ANKMY2Q8IV38 441 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 SLC22A17Q8WUG5 538 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 EDEM1Q92611 657 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 MFSD14AQ96MC6 490 aa9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 EIF2AQ9BY44 585 aaKnown RBP9.97□□□□□ -0.81
TNFRSF9-204ENST00000615230 SLC27A6Q9Y2P4 619 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms