RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 OR12D3Q9UGF7 316 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 STOML2Q9UJZ1 356 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 BRWD1Q9NSI6 2320 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 DENND4AQ7Z401 1863 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 ANHXE9PGG2 379 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 IL9P15248 144 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 PSMC3P17980 439 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 ZNF135P52742 658 aaPredicted RBP15.22■□□□□ 0.03
CD48-203ENST00000613788 RPS6KA1Q15418 735 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 SMTNL2Q2TAL5 461 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 MS4A13Q5J8X5 152 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 TXNRD3NBQ6F5E7 133 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 LRRC31Q6UY01 552 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 BBS7Q8IWZ6 715 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 KCTD6Q8NC69 237 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 FGF14Q92915 247 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 RSPRY1Q96DX4 576 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 HES6Q96HZ4 224 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 LRRC3BQ96PB8 259 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 TMPRSS4Q9NRS4 437 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.22■□□□□ 0.03
CD48-203ENST00000613788 PRKAG3Q9UGI9 489 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 XPO7Q9UIA9 1087 aaKnown RBP15.22■□□□□ 0.03
CD48-203ENST00000613788 HS3ST4Q9Y661 456 aa15.22■□□□□ 0.03
CD48-203ENST00000613788 I6L893 689 aaPredicted RBP15.21■□□□□ 0.03
CD48-203ENST00000613788 TUBB4AP04350 444 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 L1CAMP32004 1257 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 IFNAR2P48551 515 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 RWDD2BP57060 319 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 NRG1Q02297 640 aaPredicted RBP15.21■□□□□ 0.03
CD48-203ENST00000613788 FCHO2Q0JRZ9 810 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 HTR4Q13639 388 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 PDK2Q15119 407 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 DPYSL2Q16555 572 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 ATP13A4Q4VNC1 1196 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 PIK3R6Q5UE93 754 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 RAP1GAP2Q684P5 730 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 VITQ6UXI7 678 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 CHSY1Q86X52 802 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 KATNAL2Q8IYT4 538 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 CPXM2Q8N436 756 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 RIN3Q8TB24 985 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 OSCP1Q8WVF1 389 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 ATXN2LQ8WWM7 1075 aaKnown RBP15.21■□□□□ 0.03
CD48-203ENST00000613788 EPAS1Q99814 870 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 KXD1Q9BQD3 176 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 GPATCH2LQ9NWQ4 482 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 DUS2Q9NX74 493 aaKnown RBP15.21■□□□□ 0.03
CD48-203ENST00000613788 IGSF9Q9P2J2 1179 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 PACSIN2Q9UNF0 486 aaPredicted RBP15.21■□□□□ 0.03
CD48-203ENST00000613788 NUMBLQ9Y6R0 609 aa15.21■□□□□ 0.03
CD48-203ENST00000613788 F5H5T6 163 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 SCAMP3O14828 347 aaKnown RBP15.2■□□□□ 0.02
CD48-203ENST00000613788 ZRANB2O95218 330 aaKnown RBP eCLIP15.2■□□□□ 0.02
CD48-203ENST00000613788 TACR2P21452 398 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 HTR7P34969 479 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 CETN2P41208 172 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 PEX5P50542 639 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 CDH6P55285 790 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 ETF1P62495 437 aaKnown RBP15.2■□□□□ 0.02
CD48-203ENST00000613788 AUHQ13825 339 aaKnown RBP15.2■□□□□ 0.02
CD48-203ENST00000613788 KRT81Q14533 505 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 PDGFRLQ15198 375 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 FAM133BQ5BKY9 247 aaKnown RBP15.2■□□□□ 0.02
CD48-203ENST00000613788 PPP6R3Q5H9R7 873 aaPredicted RBP15.2■□□□□ 0.02
CD48-203ENST00000613788 NADSYN1Q6IA69 706 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 FAM217AQ8IXS0 508 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 RCOR2Q8IZ40 523 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 ADGRG2Q8IZP9 1017 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 EXD1Q8NHP7 514 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 KRT35Q92764 455 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 PRMT1Q99873 361 aaKnown RBP15.2■□□□□ 0.02
CD48-203ENST00000613788 TRMT61BQ9BVS5 477 aaKnown RBP15.2■□□□□ 0.02
CD48-203ENST00000613788 PLA2G2FQ9BZM2 168 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 STIM2Q9P246 746 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 LIMD1Q9UGP4 676 aa15.2■□□□□ 0.02
CD48-203ENST00000613788 NUP210Q8TEM1 1887 aaPredicted RBP15.2■□□□□ 0.02
CD48-203ENST00000613788 PRUNE2Q8WUY3 3088 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 GOLGA6L7A0A1B0GV03 622 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 TYW5A2RUC4 315 aaKnown RBP15.19■□□□□ 0.02
CD48-203ENST00000613788 CREB3O43889 395 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 SRGAP2O75044 1071 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 KRT1P04264 644 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 KDELR1P24390 212 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 ARL4AP40617 200 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 CA9Q16790 459 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 RABGAP1LQ5R372 815 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 NYAP1Q6ZVC0 841 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 ADHFE1Q8IWW8 467 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 LGI2Q8N0V4 545 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 PYROXD2Q8N2H3 581 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 ST13P5Q8NFI4 369 aaPredicted RBP15.19■□□□□ 0.02
CD48-203ENST00000613788 FAM71BQ8TC56 605 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 TMA16Q96EY4 203 aaKnown RBP15.19■□□□□ 0.02
CD48-203ENST00000613788 RBM41Q96IZ5 413 aaKnown RBP15.19■□□□□ 0.02
CD48-203ENST00000613788 TLR10Q9BXR5 811 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 MAGEB5Q9BZ81 275 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 LINC00597Q9H2U6 94 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 VANGL2Q9ULK5 521 aa15.19■□□□□ 0.02
CD48-203ENST00000613788 WNT6Q9Y6F9 365 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms