RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 CXCL17Q6UXB2 119 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 SKA1Q96BD8 255 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 LGMNQ99538 433 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 MECRQ9BV79 373 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 PRDM16Q9HAZ2 1276 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 CACNG4Q9UBN1 327 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 NR2E3Q9Y5X4 410 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 F5H423 210 aaPredicted RBP12.32□□□□□ -0.44
TUBD1-216ENST00000613721 H3BRJ5 948 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 MYL2P10916 166 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 WARSP23381 471 aaKnown RBP12.32□□□□□ -0.44
TUBD1-216ENST00000613721 IGFBP6P24592 240 aaPredicted RBP12.32□□□□□ -0.44
TUBD1-216ENST00000613721 TMPRSS15P98073 1019 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 PRKCZQ05513 592 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 FSCN1Q16658 493 aaKnown RBP12.32□□□□□ -0.44
TUBD1-216ENST00000613721 MROH9Q5TGP6 573 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 OSTM1Q86WC4 334 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 NDUFAF2Q8N183 169 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 TOP6BLQ8N6T0 577 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 COLGALT1Q8NBJ5 622 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 RNF139Q8WU17 664 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 NSMCE1Q8WV22 266 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 E2F7Q96AV8 911 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 OXNAD1Q96HP4 312 aaPredicted RBP12.32□□□□□ -0.44
TUBD1-216ENST00000613721 C7orf26Q96N11 449 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 HNRNPABQ99729 332 aaKnown RBP12.32□□□□□ -0.44
TUBD1-216ENST00000613721 FERMT1Q9BQL6 677 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 TUBB6Q9BUF5 446 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 DUSP16Q9BY84 665 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 AP5M1Q9H0R1 490 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 TLE6Q9H808 572 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 FBXO6Q9NRD1 293 aaPredicted RBP12.32□□□□□ -0.44
TUBD1-216ENST00000613721 STAP1Q9ULZ2 295 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 IPPQ9Y573 584 aa12.32□□□□□ -0.44
TUBD1-216ENST00000613721 TSC2P49815 1807 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 SYNJ2BP-COX16A0A087WUM0 186 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 HMX2A2RU54 273 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 ELNP15502 786 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 NPR3P17342 541 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 CNTFP26441 200 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 NOS2P35228 1153 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 LILRA4P59901 499 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 ADAM17P78536 824 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 AP1B1Q10567 949 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 OTUD1Q5VV17 481 aaPredicted RBP12.31□□□□□ -0.44
TUBD1-216ENST00000613721 STEAP4Q687X5 459 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 CASC4Q6P4E1 433 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 CYS1Q717R9 158 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 NDRG1Q92597 394 aaKnown RBP12.31□□□□□ -0.44
TUBD1-216ENST00000613721 EIF2B3Q9NR50 452 aaKnown RBP12.31□□□□□ -0.44
TUBD1-216ENST00000613721 MOCS1Q9NZB8 636 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 COX16Q9P0S2 106 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 SIRPGQ9P1W8 387 aa12.31□□□□□ -0.44
TUBD1-216ENST00000613721 SF3B1O75533 1304 aaKnown RBP eCLIP12.31□□□□□ -0.444e-6■■■■■ 129.2
TUBD1-216ENST00000613721 WDR27A2RRH5 827 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 HAS3O00219 553 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 RNF103O00237 685 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 CLDN5O00501 218 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 CCDC22O60826 627 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 OPHN1O60890 802 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 CTSHP09668 335 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 CRHR1P34998 444 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 FLT3LGP49771 235 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 PITX1P78337 314 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-216ENST00000613721 PURAQ00577 322 aaKnown RBP12.3□□□□□ -0.44
TUBD1-216ENST00000613721 BST1Q10588 318 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 CHI3L2Q15782 390 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 TLDC1Q6P9B6 456 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 MARK2Q7KZI7 788 aaKnown RBP12.3□□□□□ -0.44
TUBD1-216ENST00000613721 NUDCD3Q8IVD9 361 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 SIX6OS1Q8N1H7 587 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
TUBD1-216ENST00000613721 RAB3IL1Q8TBN0 382 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 N4BP2L2Q92802 583 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-216ENST00000613721 NT5C3BQ969T7 300 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 PTCD3Q96EY7 689 aaKnown RBP12.3□□□□□ -0.44
TUBD1-216ENST00000613721 P2RY11Q96G91 374 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 RSRC1Q96IZ7 334 aaKnown RBP12.3□□□□□ -0.44
TUBD1-216ENST00000613721 NPY6RQ99463 290 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 RNPEPL1Q9HAU8 725 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 LRRC4Q9HBW1 653 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 ARL8BQ9NVJ2 186 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 RPL26L1Q9UNX3 145 aaKnown RBP12.3□□□□□ -0.44
TUBD1-216ENST00000613721 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-216ENST00000613721 CCDC195A0A1B0GUA6 201 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 FAM237BA0A1B0GVD1 139 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 MEIS3P2A8K0S8 358 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 M0QYT0 321 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 PPP1R12AO14974 1030 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-216ENST00000613721 CREB3O43889 395 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 DIAPH2O60879 1101 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 PEX11AO75192 247 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 BEST1O76090 585 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 IGHA2P01877 340 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 RPSAP08865 295 aaKnown RBP12.3□□□□□ -0.44
TUBD1-216ENST00000613721 ACAT1P24752 427 aaKnown RBP12.3□□□□□ -0.44
TUBD1-216ENST00000613721 ELF1P32519 619 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 GLUD2P49448 558 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 PDK1Q15118 436 aa12.3□□□□□ -0.44
TUBD1-216ENST00000613721 GNASQ5JWF2 1037 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms