RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 SV2CQ496J9 727 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 SLC45A4Q5BKX6 768 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 CRYBG2Q8N1P7 616 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 TRIB2Q92519 343 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 CPT1BQ92523 772 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 GDAP2Q9NXN4 497 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 KANSL3Q9P2N6 904 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 ST3GAL5Q9UNP4 418 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 CHMP2BQ9UQN3 213 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 OR6B1O95007 311 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 SLC10A3P09131 477 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 SETSIPP0DME0 302 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 SERPINB3P29508 390 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 MLH1P40692 756 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 PNPLA4P41247 253 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 MAGEA10P43363 369 aaPredicted RBP17.01■□□□□ 0.31
CNOT3-208ENST00000613073 BCAT1P54687 386 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 BASP1P80723 227 aaKnown RBP17.01■□□□□ 0.31
CNOT3-208ENST00000613073 MRPS6P82932 125 aaKnown RBP17.01■□□□□ 0.31
CNOT3-208ENST00000613073 ACBD5Q5T8D3 534 aaPredicted RBP17.01■□□□□ 0.31
CNOT3-208ENST00000613073 FYB2Q5VWT5 728 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 MYLK4Q86YV6 388 aaPredicted RBP17.01■□□□□ 0.31
CNOT3-208ENST00000613073 CCDC33Q8N5R6 958 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 SLC25A41Q8N5S1 370 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 ZNF75CPQ92670 426 aaPredicted RBP17.01■□□□□ 0.31
CNOT3-208ENST00000613073 RNF157Q96PX1 679 aa17.01■□□□□ 0.31
CNOT3-208ENST00000613073 KLF6Q99612 283 aaPredicted RBP17.01■□□□□ 0.31
CNOT3-208ENST00000613073 H7C0C1 242 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 GOLGA8RI6L899 631 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 M0QZ92 97 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 RNASEH1O60930 286 aaKnown RBP17■□□□□ 0.31
CNOT3-208ENST00000613073 ENDOD1O94919 500 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 YY1P25490 414 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 ATP5OP48047 213 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 RABGGTBP53611 331 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 WSCD1Q658N2 575 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 LCA5Q86VQ0 697 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 DENND1AQ8TEH3 1009 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 CLPTM1LQ96KA5 538 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 GAD1Q99259 594 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 TAS2R1Q9NYW7 299 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 FARP1Q9Y4F1 1045 aaPredicted RBP17■□□□□ 0.31
CNOT3-208ENST00000613073 TIMM13Q9Y5L4 95 aaPredicted RBP17■□□□□ 0.31
CNOT3-208ENST00000613073 PDCD11Q14690 1871 aaKnown RBP17■□□□□ 0.31
CNOT3-208ENST00000613073 C2CD2LO14523 706 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 CYB561D2O14569 222 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 IGHA2P01877 340 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 ADRA1DP25100 572 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 HOXC8P31273 242 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 ROR1Q01973 937 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 HIF1AQ16665 826 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 MSS51Q4VC12 460 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 FNBP1LQ5T0N5 605 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 TAF2Q6P1X5 1199 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 CENPUQ71F23 418 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 SDCCAG8Q86SQ7 713 aaPredicted RBP17■□□□□ 0.31
CNOT3-208ENST00000613073 RELL1Q8IUW5 271 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 MAP7D3Q8IWC1 876 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 CENPKQ9BS16 269 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 MTG1Q9BT17 334 aaPredicted RBP17■□□□□ 0.31
CNOT3-208ENST00000613073 PCDH18Q9HCL0 1135 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 CLIC5Q9NZA1 410 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 GTF2IRD1Q9UHL9 959 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 TRPM7Q96QT4 1865 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 BEST1O76090 585 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 BOLA3Q53S33 107 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 PPIL6Q8IXY8 311 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 PLD5Q8N7P1 536 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 B3GALNT2Q8NCR0 500 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 FOXP3Q9BZS1 431 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 SHOC2Q9UQ13 582 aa17■□□□□ 0.31
CNOT3-208ENST00000613073 DPYSL4O14531 572 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 ESRRAP11474 423 aaPredicted RBP16.99■□□□□ 0.31
CNOT3-208ENST00000613073 PGM1P36871 562 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 STAT4Q14765 748 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 NOMO1Q15155 1222 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.99■□□□□ 0.31
CNOT3-208ENST00000613073 RBM12BQ8IXT5 1001 aaKnown RBP16.99■□□□□ 0.31
CNOT3-208ENST00000613073 RNF169Q8NCN4 708 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 PCDH19Q8TAB3 1148 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 ABTB1Q969K4 478 aaPredicted RBP16.99■□□□□ 0.31
CNOT3-208ENST00000613073 FAM149B1Q96BN6 582 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 NSL1Q96IY1 281 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 FRMD8P1Q9BZ68 369 aaPredicted RBP16.99■□□□□ 0.31
CNOT3-208ENST00000613073 DHX35Q9H5Z1 703 aaKnown RBP16.99■□□□□ 0.31
CNOT3-208ENST00000613073 ABT1Q9ULW3 272 aaKnown RBP16.99■□□□□ 0.31
CNOT3-208ENST00000613073 SYNJ2BP-COX16A0A087WUM0 186 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 FAM155AB1AL88 458 aaPredicted RBP16.99■□□□□ 0.31
CNOT3-208ENST00000613073 TMEM63AO94886 807 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 CHRNA1P02708 482 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 TROVE2P10155 538 aaKnown RBP eCLIP16.99■□□□□ 0.31
CNOT3-208ENST00000613073 GCAP28676 217 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 FLT3LGP49771 235 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 CDK7P50613 346 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 SNX16P57768 344 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 LSAMPQ13449 338 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 TFDP2Q14188 446 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 PIGZQ86VD9 579 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 SPATA24Q86W54 205 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms