RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PYDC2Q56P42 97 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.97□□□□□ -0.97
TTC28-208ENST00000612946 TFB1MQ8WVM0 346 aaKnown RBP8.97□□□□□ -0.97
TTC28-208ENST00000612946 FAM89AQ96GI7 184 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 PRKD2Q9BZL6 878 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 RIBC2Q9H4K1 309 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 DMGDHQ9UI17 866 aaKnown RBP8.97□□□□□ -0.97
TTC28-208ENST00000612946 PCP4L1A6NKN8 68 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 NDUFS3O75489 264 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 ZBTB11O95625 1053 aaPredicted RBP8.97□□□□□ -0.97
TTC28-208ENST00000612946 PAX3P23760 479 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 S100A2P29034 98 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 PHKA2P46019 1235 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 EIF5AL1Q6IS14 154 aaKnown RBP8.97□□□□□ -0.97
TTC28-208ENST00000612946 DPF2Q92785 391 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 GIT1Q9Y2X7 761 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 TTLL9Q3SXZ7 439 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 AFG1LQ8WV93 481 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 BIRC8Q96P09 236 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 FAM49BQ9NUQ9 324 aa8.97□□□□□ -0.97
TTC28-208ENST00000612946 RPL14P50914 215 aaKnown RBP8.96□□□□□ -0.97
TTC28-208ENST00000612946 ZNF135P52742 658 aaPredicted RBP8.96□□□□□ -0.97
TTC28-208ENST00000612946 TXNRD1Q16881 649 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 MFSD14BQ5SR56 506 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 RBM4BQ9BQ04 359 aaKnown RBP8.96□□□□□ -0.97
TTC28-208ENST00000612946 RBM4Q9BWF3 364 aaKnown RBP8.96□□□□□ -0.97
TTC28-208ENST00000612946 LRRC40Q9H9A6 602 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 GLI2P10070 1586 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 ISPDA4D126 451 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 PRKD3O94806 890 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 RARBP10826 455 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 KLRC1P26715 233 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 BST2Q10589 180 aaKnown RBP8.96□□□□□ -0.97
TTC28-208ENST00000612946 RRP1BQ14684 758 aaKnown RBP8.96□□□□□ -0.97
TTC28-208ENST00000612946 PRMT5O14744 637 aaPredicted RBP8.96□□□□□ -0.97
TTC28-208ENST00000612946 APOC1P02654 83 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 RALAP11233 206 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 ZSWIM7Q19AV6 140 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 FOXR2Q6PJQ5 311 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 MROH2AA6NES4 1674 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 BCLAF3A2AJT9 711 aaKnown RBP8.96□□□□□ -0.97
TTC28-208ENST00000612946 E9PBE3 544 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 TRAFD1O14545 582 aaPredicted RBP8.96□□□□□ -0.97
TTC28-208ENST00000612946 INPP4BO15327 924 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 HS6ST1O60243 411 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 ECE2O60344 883 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 YAP1P46937 504 aaKnown RBP8.96□□□□□ -0.97
TTC28-208ENST00000612946 PGDP52209 483 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 PERM1Q5SV97 790 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 CNSTQ6PJW8 725 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 ZNF560Q96MR9 790 aa8.96□□□□□ -0.97
TTC28-208ENST00000612946 PAK6Q9NQU5 681 aaPredicted RBP8.96□□□□□ -0.97
TTC28-208ENST00000612946 LOC100506127A0A0U1RQW1 187 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 IFRD1O00458 451 aaPredicted RBP8.96□□□□□ -0.98
TTC28-208ENST00000612946 PDGFRAP16234 1089 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 CDO1Q16878 200 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 FBXO43Q4G163 708 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 TWF2Q6IBS0 349 aaKnown RBP8.96□□□□□ -0.98
TTC28-208ENST00000612946 AGR3Q8TD06 166 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 WRNIP1Q96S55 665 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 CHMP1AQ9HD42 196 aaPredicted RBP8.96□□□□□ -0.98
TTC28-208ENST00000612946 CMTM6Q9NX76 183 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 SSR3Q9UNL2 185 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 ILVBLA1L0T0 632 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 FAM196BA6NMK8 535 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 EML1O00423 815 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 ENTPD5O75356 428 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 ETS1P14921 441 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 SYDE2Q5VT97 1194 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 TMEM109Q9BVC6 243 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 PRDM8Q9NQV8 689 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 NFKBIL1Q9UBC1 381 aaPredicted RBP8.96□□□□□ -0.98
TTC28-208ENST00000612946 CHORDC1Q9UHD1 332 aaPredicted RBP8.96□□□□□ -0.98
TTC28-208ENST00000612946 HERVK_113P62684 666 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 AGKQ53H12 422 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 HECTD3Q5T447 861 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 GATAD2AQ86YP4 633 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 EPHX4Q8IUS5 362 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 FBXL16Q8N461 479 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 GTPBP2Q9BX10 602 aaKnown RBP8.96□□□□□ -0.98
TTC28-208ENST00000612946 CITO14578 2027 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 FRMPD2Q68DX3 1309 aaPredicted RBP8.96□□□□□ -0.98
TTC28-208ENST00000612946 PGAM1P18669 254 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 OVGP1Q12889 678 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 SMCO1Q147U7 214 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 FBXO36Q8NEA4 188 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 PLEKHO2Q8TD55 490 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 C17orf75Q9HAS0 396 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 TRPV5Q9NQA5 729 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 RABL2AQ9UBK7 228 aaPredicted RBP8.96□□□□□ -0.98
TTC28-208ENST00000612946 SLC39A10Q9ULF5 831 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 NRXN1Q9ULB1 1477 aa8.96□□□□□ -0.98
TTC28-208ENST00000612946 ERI2A8K979 691 aaKnown RBP8.95□□□□□ -0.98
TTC28-208ENST00000612946 H6PDO95479 791 aa8.95□□□□□ -0.98
TTC28-208ENST00000612946 FXR2P51116 673 aaKnown RBP eCLIP8.95□□□□□ -0.984e-6■■■□□ 18.4
TTC28-208ENST00000612946 GPC3P51654 580 aa8.95□□□□□ -0.98
TTC28-208ENST00000612946 SLC39A6Q13433 755 aa8.95□□□□□ -0.98
TTC28-208ENST00000612946 DPP8Q6V1X1 898 aaPredicted RBP8.95□□□□□ -0.98
TTC28-208ENST00000612946 TTC29Q8NA56 475 aaPredicted RBP8.95□□□□□ -0.98
TTC28-208ENST00000612946 TBCBQ99426 244 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms