RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ABCG1P45844 678 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 KLC1Q07866 573 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 CACNB2Q08289 660 aaPredicted RBP6.55□□□□□ -1.36
SNX13-213ENST00000611725 RCN1Q15293 331 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 TBCCQ15814 346 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 FAM182AQ5T1J6 154 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 LINC00523Q86TU6 105 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 IFNLR1Q8IU57 520 aaPredicted RBP6.55□□□□□ -1.36
SNX13-213ENST00000611725 SPATA2LQ8IUW3 424 aaPredicted RBP6.55□□□□□ -1.36
SNX13-213ENST00000611725 MAB21L3Q8N8X9 362 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 BTBD10Q9BSF8 475 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 NMUR2Q9GZQ4 415 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 GTSE1Q9NYZ3 720 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 VANGL2Q9ULK5 521 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 SMIM35A0A1B0GVV1 85 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 AKR1A1P14550 325 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 TPH1P17752 444 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 PMLP29590 882 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 PPP1R15BQ5SWA1 713 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 TRMT10BQ6PF06 316 aaKnown RBP6.55□□□□□ -1.36
SNX13-213ENST00000611725 DCP1BQ8IZD4 617 aaKnown RBP6.55□□□□□ -1.36
SNX13-213ENST00000611725 TTC8Q8TAM2 541 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 TAGLN3Q9UI15 199 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 TRHDEQ9UKU6 1024 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 PTCH2Q9Y6C5 1203 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 NEMP1O14524 444 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 PFDN6O15212 129 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 VHLP40337 213 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 LILRA4P59901 499 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 AP2B1P63010 937 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 SLC25A52Q3SY17 297 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 PACS1Q6VY07 963 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 DUSP16Q9BY84 665 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 ILKAPQ9H0C8 392 aaPredicted RBP6.55□□□□□ -1.36
SNX13-213ENST00000611725 NSMCE4AQ9NXX6 385 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 DTLQ9NZJ0 730 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 CYTH4Q9UIA0 394 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 METTL18O95568 372 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 STAU1O95793 577 aaKnown RBP6.55□□□□□ -1.36
SNX13-213ENST00000611725 DNAJB2P25686 324 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 PSMB4P28070 264 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 ZNF135P52742 658 aaPredicted RBP6.55□□□□□ -1.36
SNX13-213ENST00000611725 CCDC15Q0P6D6 951 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 ART3Q13508 389 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 TRIP10Q15642 601 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 NFE2Q16621 373 aaPredicted RBP6.55□□□□□ -1.36
SNX13-213ENST00000611725 TRMT5Q32P41 509 aaKnown RBP6.55□□□□□ -1.36
SNX13-213ENST00000611725 PRAMEF19Q5SWL8 479 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 OVOS1Q6IE37 1185 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 C16orf46Q6P387 395 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 CXCL17Q6UXB2 119 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 ARCQ7LC44 396 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 CHSY1Q86X52 802 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 MIB1Q86YT6 1006 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 TOP6BLQ8N6T0 577 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 OR52K1Q8NGK4 314 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 ACMSDQ8TDX5 336 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 CERS2Q96G23 380 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 Q9H521 79 aa6.55□□□□□ -1.36
SNX13-213ENST00000611725 FARP1Q9Y4F1 1045 aaPredicted RBP6.55□□□□□ -1.36
SNX13-213ENST00000611725 TCRBV7S3A2A0A539 114 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 DPYSL4O14531 572 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 ODC1P11926 461 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 TPSB2P20231 275 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 PROZP22891 400 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 GRIK1P39086 918 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 THPOP40225 353 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 SERPINB8P50452 374 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 MRPS35P82673 323 aaKnown RBP6.54□□□□□ -1.36
SNX13-213ENST00000611725 OCRLQ01968 901 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 MAP2K5Q13163 448 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 TPSAB1Q15661 275 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 OLFML1Q6UWY5 402 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 FAM35AQ86V20 835 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 TMEM86AQ8N2M4 240 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 PQLC3Q8N755 202 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 SLC35F5Q8WV83 523 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 SPDL1Q96EA4 605 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 SNX27Q96L92 541 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 HNRNPABQ99729 332 aaKnown RBP6.54□□□□□ -1.36
SNX13-213ENST00000611725 PFDN4Q9NQP4 134 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 CNGB3Q9NQW8 809 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.54□□□□□ -1.36
SNX13-213ENST00000611725 CASTOR2A6NHX0 329 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 XPO1O14980 1071 aaKnown RBP6.54□□□□□ -1.36
SNX13-213ENST00000611725 GPR182O15218 404 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 SLC4A1P02730 911 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 ITGA2BP08514 1039 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 YBX3P16989 372 aaKnown RBP eCLIP6.54□□□□□ -1.36
SNX13-213ENST00000611725 DPYSL2Q16555 572 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 FSCN1Q16658 493 aaKnown RBP6.54□□□□□ -1.36
SNX13-213ENST00000611725 TNFAIP8L3Q5GJ75 292 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 KIAA1841Q6NSI8 718 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 C4orf50Q6ZRC1 276 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 BRI3BPQ8WY22 251 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 SERAC1Q96JX3 654 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 C7orf26Q96N11 449 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 PLLPQ9Y342 182 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 MAGEB16A2A368 324 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 GLTPD2A6NH11 291 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms