RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 ZNF148Q9UQR1 794 aa23.05■■□□□ 1.28
UBE3C-209ENST00000611269 PRRC2BQ5JSZ5 2229 aaKnown RBP23.04■■□□□ 1.28
UBE3C-209ENST00000611269 A6NNZ2 444 aa23.04■■□□□ 1.28
UBE3C-209ENST00000611269 SHOX2O60902 331 aaPredicted RBP23.04■■□□□ 1.28
UBE3C-209ENST00000611269 SDC4P31431 198 aa23.04■■□□□ 1.28
UBE3C-209ENST00000611269 C15orf59Q2T9L4 293 aaPredicted RBP23.04■■□□□ 1.28
UBE3C-209ENST00000611269 TUBB8Q3ZCM7 444 aa23.04■■□□□ 1.28
UBE3C-209ENST00000611269 TCEAL5Q5H9L2 206 aa23.04■■□□□ 1.28
UBE3C-209ENST00000611269 ZNF697Q5TEC3 545 aa23.04■■□□□ 1.28
UBE3C-209ENST00000611269 BTBD8Q5XKL5 378 aa23.04■■□□□ 1.28
UBE3C-209ENST00000611269 DENND2CQ68D51 928 aa23.04■■□□□ 1.28
UBE3C-209ENST00000611269 ELMOD1Q8N336 334 aa23.04■■□□□ 1.28
UBE3C-209ENST00000611269 ZNF512Q96ME7 567 aaPredicted RBP23.04■■□□□ 1.28
UBE3C-209ENST00000611269 DDX23Q9BUQ8 820 aaKnown RBP23.04■■□□□ 1.28
UBE3C-209ENST00000611269 TLR8Q9NR97 1041 aaKnown RBP23.04■■□□□ 1.28
UBE3C-209ENST00000611269 TFE3P19532 575 aaPredicted RBP23.03■■□□□ 1.28
UBE3C-209ENST00000611269 NOS2P35228 1153 aa23.03■■□□□ 1.28
UBE3C-209ENST00000611269 ATP11AP98196 1134 aa23.03■■□□□ 1.28
UBE3C-209ENST00000611269 KCNC3Q14003 757 aa23.03■■□□□ 1.28
UBE3C-209ENST00000611269 SH3PXD2AQ5TCZ1 1133 aa23.03■■□□□ 1.28
UBE3C-209ENST00000611269 KDM7AQ6ZMT4 941 aa23.03■■□□□ 1.28
UBE3C-209ENST00000611269 CYP4V2Q6ZWL3 525 aaPredicted RBP23.03■■□□□ 1.28
UBE3C-209ENST00000611269 ARHGAP18Q8N392 663 aa23.03■■□□□ 1.28
UBE3C-209ENST00000611269 SH2D3CQ8N5H7 860 aa23.03■■□□□ 1.28
UBE3C-209ENST00000611269 PEBP4Q96S96 227 aa23.03■■□□□ 1.28
UBE3C-209ENST00000611269 ZNF334Q9HCZ1 680 aaPredicted RBP23.03■■□□□ 1.28
UBE3C-209ENST00000611269 ABCC13Q9NSE7 274 aa23.03■■□□□ 1.28
UBE3C-209ENST00000611269 DOCK6Q96HP0 2047 aa23.03■■□□□ 1.28
UBE3C-209ENST00000611269 CST8O60676 142 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 ZDHHC11BP0C7U3 371 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 HOXA9P31269 272 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 ARSEP51690 589 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 IFFO1Q0D2I5 559 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 SLC29A2Q14542 456 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 CDO1Q16878 200 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 BOLA3Q53S33 107 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 TMEM109Q9BVC6 243 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 TRIM62Q9BVG3 475 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 ADAM33Q9BZ11 813 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 FOXP3Q9BZS1 431 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 RIPK2O43353 540 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 PTPN9P43378 593 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 PSEN1P49768 467 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 PITX1P78337 314 aaPredicted RBP23.02■■□□□ 1.28
UBE3C-209ENST00000611269 HYAL1Q12794 435 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 ELMSAN1Q6PJG2 1045 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 CROCCP2Q86T23 111 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 HS6ST3Q8IZP7 471 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 PDZD8Q8NEN9 1154 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 OVCA2Q8WZ82 227 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 ZDHHC7Q9NXF8 308 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 LMCD1Q9NZU5 365 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 UXTQ9UBK9 157 aaPredicted RBP23.02■■□□□ 1.28
UBE3C-209ENST00000611269 NUDT5Q9UKK9 219 aa23.02■■□□□ 1.28
UBE3C-209ENST00000611269 PRPSAP2O60256 369 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 CD48P09326 243 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 HNRNPA1P09651 372 aaKnown RBP eCLIP23.01■■□□□ 1.27
UBE3C-209ENST00000611269 DESP17661 470 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 SLC25A52Q3SY17 297 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 RAB6CQ53S08 254 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 HIBCHQ6NVY1 386 aaPredicted RBP23.01■■□□□ 1.27
UBE3C-209ENST00000611269 BEND5Q7L4P6 421 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 TEKT4Q8WW24 435 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 HSPH1Q92598 858 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 NT5C3BQ969T7 300 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 FAM161BQ96MY7 647 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 TBCBQ99426 244 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 NPY6RQ99463 290 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 RAB6CQ9H0N0 254 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 HCFC1R1Q9NWW0 138 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 CALCOCO1Q9P1Z2 691 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 STAP1Q9ULZ2 295 aa23.01■■□□□ 1.27
UBE3C-209ENST00000611269 ZNF840PA6NDX5 716 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 OBSL1O75147 1896 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 SULT1E1P49888 294 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 OTUD4Q01804 1114 aaKnown RBP23■■□□□ 1.27
UBE3C-209ENST00000611269 KRT71Q3SY84 523 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 IZUMO3Q5VZ72 239 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 TMEM150AQ86TG1 271 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 HOOK3Q86VS8 718 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 TMC8Q8IU68 726 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 RELL1Q8IUW5 271 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 ADAM32Q8TC27 787 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 ACTL9Q8TC94 416 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 FAM172AQ8WUF8 416 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 CORO1BQ9BR76 489 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 LRRC3Q9BY71 257 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 IL21Q9HBE4 155 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23■■□□□ 1.27
UBE3C-209ENST00000611269 CLIC5Q9NZA1 410 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 ANAPC1Q9H1A4 1944 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 CCDC195A0A1B0GUA6 201 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 SHBGP04278 402 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 NR1D1P20393 614 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 ACTN2P35609 894 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 ADGRE1Q14246 886 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 PDK2Q15119 407 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 OTUD1Q5VV17 481 aaPredicted RBP23■■□□□ 1.27
UBE3C-209ENST00000611269 CEP128Q6ZU80 1094 aa23■■□□□ 1.27
UBE3C-209ENST00000611269 VSIG1Q86XK7 387 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms