RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 POMCP01189 267 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 SNRPAP09012 282 aaKnown RBP12.32□□□□□ -0.44
USP6NL-206ENST00000609853 USP17L7P0C7H9 530 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 CNTFP26441 200 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 SERPINB6P35237 376 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 SERPINB9P50453 376 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 TPI1P60174 286 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 PITX1P78337 314 aaPredicted RBP12.32□□□□□ -0.44
USP6NL-206ENST00000609853 SLC18A2Q05940 514 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 ZNF33AQ06730 810 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 TRIM32Q13049 653 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 EFTUD2Q15029 972 aaKnown RBP eCLIP12.32□□□□□ -0.44
USP6NL-206ENST00000609853 MAP3K21Q5TCX8 1036 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 RNF43Q68DV7 783 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 OVOS1Q6IE37 1185 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 LRRC8BQ6P9F7 803 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 C4orf50Q6ZRC1 276 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 HFE2Q6ZVN8 426 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 MRRFQ96E11 262 aaKnown RBP12.32□□□□□ -0.44
USP6NL-206ENST00000609853 CFAP36Q96G28 342 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 P2RY11Q96G91 374 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 PKMYT1Q99640 499 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 PAIP2Q9BPZ3 127 aaKnown RBP12.32□□□□□ -0.44
USP6NL-206ENST00000609853 TSEN34Q9BSV6 310 aaKnown RBP12.32□□□□□ -0.44
USP6NL-206ENST00000609853 WDCPQ9H6R7 721 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 KIF9Q9HAQ2 790 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 RGS18Q9NS28 235 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 HAUS2Q9NVX0 235 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 DDIT4Q9NX09 232 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 PRKAG3Q9UGI9 489 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 TTLL3Q9Y4R7 772 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 CAPN7Q9Y6W3 813 aa12.32□□□□□ -0.44
USP6NL-206ENST00000609853 MYO18AQ92614 2054 aaKnown RBP12.32□□□□□ -0.44
USP6NL-206ENST00000609853 SDR42E2A6NKP2 422 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 ERI2A8K979 691 aaKnown RBP12.31□□□□□ -0.44
USP6NL-206ENST00000609853 RNF103O00237 685 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 KRT38O76015 456 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 C1QAP02745 245 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 ALADP13716 330 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 VAV1P15498 845 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 IGFBP6P24592 240 aaPredicted RBP12.31□□□□□ -0.44
USP6NL-206ENST00000609853 FOXN2P32314 431 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 ACLYP53396 1101 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 AP1B1Q10567 949 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 NAB1Q13506 487 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 FAXCQ5TGI0 409 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 STEAP4Q687X5 459 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 ZNF449Q6P9G9 518 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 GLB1LQ6UWU2 654 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 CD300LGQ6UXG3 332 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 CHRDL2Q6WN34 429 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 ZNF534Q76KX8 674 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 BHLHA9Q7RTU4 235 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 AGGF1Q8N302 714 aaeCLIP12.31□□□□□ -0.44
USP6NL-206ENST00000609853 COLGALT1Q8NBJ5 622 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 RNF169Q8NCN4 708 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 APOPT1Q96IL0 206 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 ZIC5Q96T25 663 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 VAT1Q99536 393 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 LGMNQ99538 433 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 PAAF1Q9BRP4 392 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 MAGEB5Q9BZ81 275 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP6NL-206ENST00000609853 KANSL3Q9P2N6 904 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 CACNG4Q9UBN1 327 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 TRHDEQ9UKU6 1024 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 PCDHA11Q9Y5I1 949 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 ZNF638Q14966 1978 aaKnown RBP12.31□□□□□ -0.44
USP6NL-206ENST00000609853 SYNJ2BP-COX16A0A087WUM0 186 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 TMEM189-UBE2V1I3L0A0 370 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 DNAJC8O75937 253 aaPredicted RBP12.31□□□□□ -0.44
USP6NL-206ENST00000609853 COL6A1P12109 1028 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 ERCC2P18074 760 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 SCTRP47872 440 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 PPIDQ08752 370 aaKnown RBP12.31□□□□□ -0.44
USP6NL-206ENST00000609853 CCDC15Q0P6D6 951 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 IFRD2Q12894 506 aaPredicted RBP12.31□□□□□ -0.44
USP6NL-206ENST00000609853 DNAJC3Q13217 504 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 TTC31Q49AM3 519 aaPredicted RBP12.31□□□□□ -0.44
USP6NL-206ENST00000609853 BSPRYQ5W0U4 402 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 LVRNQ6Q4G3 990 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 UNC5AQ6ZN44 842 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 GPRIN1Q7Z2K8 1008 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 CCNYQ8ND76 341 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 TTC17Q96AE7 1141 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 STAMBPL1Q96FJ0 436 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 GLT1D1Q96MS3 346 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 CFHR5Q9BXR6 569 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 OSBPL2Q9H1P3 480 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 PRDM12Q9H4Q4 367 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 MKS1Q9NXB0 559 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 COX16Q9P0S2 106 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 SRRDQ9UH36 339 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 THSD7BQ9C0I4 1608 aa12.31□□□□□ -0.44
USP6NL-206ENST00000609853 NLRC5Q86WI3 1866 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 FRMPD3Q5JV73 1810 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 FAM159BA6NKW6 160 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 AP3B1O00203 1094 aa12.3□□□□□ -0.44
USP6NL-206ENST00000609853 DNM1LO00429 736 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms