RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 RNF34Q969K3 372 aa14.81□□□□□ -0.04
HDDC2-209ENST00000609477 XPO4Q9C0E2 1151 aaKnown RBP14.81□□□□□ -0.04
HDDC2-209ENST00000609477 SEPT11Q9NVA2 429 aaKnown RBP14.81□□□□□ -0.04
HDDC2-209ENST00000609477 PLK2Q9NYY3 685 aa14.81□□□□□ -0.04
HDDC2-209ENST00000609477 LUC7L2Q9Y383 392 aaKnown RBP14.81□□□□□ -0.04
HDDC2-209ENST00000609477 LILRB5O75023 590 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 ENDOD1O94919 500 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 KRT3P12035 628 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 HNRNPLP14866 589 aaKnown RBP eCLIP14.8□□□□□ -0.04
HDDC2-209ENST00000609477 CXCR3P49682 368 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 DGKEP52429 567 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 MESP2Q0VG99 397 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 DMC1Q14565 340 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 C2orf27AQ580R0 203 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 NADSYN1Q6IA69 706 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 SDE2Q6IQ49 451 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 MON1BQ7L1V2 547 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 BNIPLQ7Z465 357 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 ANKS1BQ7Z6G8 1248 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 VPS36Q86VN1 386 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 LONP2Q86WA8 852 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 DRC7Q8IY82 874 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.8□□□□□ -0.04
HDDC2-209ENST00000609477 ZNF513Q8N8E2 541 aaPredicted RBP14.8□□□□□ -0.04
HDDC2-209ENST00000609477 IL17RCQ8NAC3 791 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 WFIKKN2Q8TEU8 576 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 UCMAQ8WVF2 138 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 C11orf70Q9BRQ4 267 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 HAUS4Q9H6D7 363 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 WDCPQ9H6R7 721 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 EBF1Q9UH73 591 aa14.8□□□□□ -0.04
HDDC2-209ENST00000609477 ANKRD62A6NC57 917 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 SIGLEC16A6NMB1 481 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 F5H5T6 163 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 GOLGA8SH3BPF8 625 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 CHRM1P11229 460 aaPredicted RBP14.79□□□□□ -0.04
HDDC2-209ENST00000609477 NTSR1P30989 418 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 SDC4P31431 198 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 SLC6A4P31645 630 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 FLT3P36888 993 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 PTPN9P43378 593 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 SULT1E1P49888 294 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 SEC13P55735 322 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 PITX1P78337 314 aaPredicted RBP14.79□□□□□ -0.04
HDDC2-209ENST00000609477 DEUP1Q05D60 604 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 NME3Q13232 169 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 CRY1Q16526 586 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 C2CD6Q53TS8 623 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 RABGAP1LQ5R372 815 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 SPECC1LQ69YQ0 1117 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 PKN3Q6P5Z2 889 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 KIAA0907Q7Z7F0 614 aaPredicted RBP14.79□□□□□ -0.04
HDDC2-209ENST00000609477 WDR5BQ86VZ2 330 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 MCOLN2Q8IZK6 566 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 FIBINQ8TAL6 211 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 BHMTQ93088 406 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 C1orf74Q96LT6 269 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 PPP1R9BQ96SB3 815 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 SELENOOQ9BVL4 669 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 PIGVQ9NUD9 493 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 ARHGEF38Q9NXL2 777 aa14.79□□□□□ -0.04
HDDC2-209ENST00000609477 C2CD4BA6NLJ0 364 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 PRRT4C9JH25 899 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 TRIM24O15164 1050 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 TSPAN3O60637 253 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 TBL1XO60907 577 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 ALDH1A2O94788 518 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 APBB3O95704 486 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 MOCS2O96007 188 aaPredicted RBP14.78□□□□□ -0.04
HDDC2-209ENST00000609477 GYPCP04921 128 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 SERPING1P05155 500 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 TPM1P09493 284 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 PDGFRAP16234 1089 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 DESP17661 470 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 TACR2P21452 398 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 HNRNPH3P31942 346 aaKnown RBP14.78□□□□□ -0.04
HDDC2-209ENST00000609477 RDXP35241 583 aaKnown RBP14.78□□□□□ -0.04
HDDC2-209ENST00000609477 TIE1P35590 1138 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 OXCT1P55809 520 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 SLC12A1Q13621 1099 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 RFWD3Q6PCD5 774 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 TSSK4Q6SA08 328 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 SARM1Q6SZW1 724 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 STRADAQ7RTN6 431 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 ZNF571Q7Z3V5 609 aaPredicted RBP14.78□□□□□ -0.04
HDDC2-209ENST00000609477 CHSY1Q86X52 802 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 AHI1Q8N157 1196 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 ALLCQ8N6M5 410 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 TXNDC5Q8NBS9 432 aaKnown RBP14.78□□□□□ -0.04
HDDC2-209ENST00000609477 RNF214Q8ND24 703 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 NKD2Q969F2 451 aaPredicted RBP14.78□□□□□ -0.04
HDDC2-209ENST00000609477 TRIM11Q96F44 468 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 P2RY11Q96G91 374 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 HAPLN3Q96S86 360 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 PRMT1Q99873 361 aaKnown RBP14.78□□□□□ -0.04
HDDC2-209ENST00000609477 ANP32EQ9BTT0 268 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 POLMQ9NP87 494 aaPredicted RBP14.78□□□□□ -0.04
HDDC2-209ENST00000609477 METTL5Q9NRN9 209 aaKnown RBP14.78□□□□□ -0.04
HDDC2-209ENST00000609477 ELOVL2Q9NXB9 296 aa14.78□□□□□ -0.04
HDDC2-209ENST00000609477 SYNJ2BP-COX16A0A087WUM0 186 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms