RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 GABBR2O75899 941 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 SMC2O95347 1197 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 TBXAS1P24557 533 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 FMO5P49326 533 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 ZNF445P59923 1031 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 LRRC63Q05C16 580 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 CAMK2GQ13555 558 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 ZNF423Q2M1K9 1284 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 FNDC3BQ53EP0 1204 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 ISM2Q6H9L7 571 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 PMF1Q6P1K2 205 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 TMEM270Q6UE05 265 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 LCLAT1Q6UWP7 414 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 KIAA0907Q7Z7F0 614 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 NAXDQ8IW45 347 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 SCML4Q8N228 414 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 ZNF366Q8N895 744 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 SPATA20Q8TB22 786 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 WFIKKN2Q8TEU8 576 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 SLC35F5Q8WV83 523 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 TMEM245Q9H330 911 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 METTL14Q9HCE5 456 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 PCDHB4Q9Y5E5 795 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 CKAP5Q14008 2032 aa13.95□□□□□ -0.18
POLR2J3-219ENST00000608621 SRRM3A6NNA2 597 aaPredicted RBP13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 LATS1O95835 1130 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 PAEPP09466 180 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 PABPC1P11940 636 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 ACSL1P33121 698 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 SGSHP51688 502 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 BNC1Q01954 994 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 CNGA2Q16280 664 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 MBLAC2Q68D91 279 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 RFWD3Q6PCD5 774 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 RAB44Q7Z6P3 723 aaPredicted RBP13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 ADIPOR2Q86V24 386 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 PNPLA1Q8N8W4 532 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 C1orf216Q8TAB5 229 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 ZCCHC14Q8WYQ9 949 aaKnown RBP13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 KAT5Q92993 513 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 ZSWIM1Q9BR11 485 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 LHX5Q9H2C1 402 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 GAREM1Q9H706 876 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 IL21RQ9HBE5 538 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 GGA2Q9UJY4 613 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 NUMA1Q14980 2115 aa13.94□□□□□ -0.18
POLR2J3-219ENST00000608621 KNL1Q8NG31 2342 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 ACSL4O60488 711 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 TBL1XO60907 577 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 CALCAP01258 141 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 FTH1P19P0C7X4 201 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 MATKP42679 507 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 CSNK1EP49674 416 aaKnown RBP13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 PTPRNQ16849 979 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 PIK3R6Q5UE93 754 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 MSANTD2Q6P1R3 559 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 UNC45BQ8IWX7 931 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 AHI1Q8N157 1196 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 PPM1KQ8N3J5 372 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 WFDC5Q8TCV5 224 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 SETD7Q8WTS6 366 aaKnown RBP13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 CLEC4CQ8WTT0 213 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 IRGQQ8WZA9 623 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 NT5C1BQ96P26 610 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 GTPBP4Q9BZE4 634 aaKnown RBP13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 C6orf106Q9H6K1 298 aaPredicted RBP13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 PRSS16Q9NQE7 514 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 STIM2Q9P246 746 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 SUN2Q9UH99 717 aa13.93□□□□□ -0.18
POLR2J3-219ENST00000608621 A0A1B0GVT2 93 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 M0QYV0 167 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 PSMA7O14818 248 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 PMM2O15305 246 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 CBFA2T3O75081 653 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 IGLV3-27P01718 113 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 LTFP02788 710 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 ATP5BP06576 529 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 DLDP09622 509 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 POLR2EP19388 210 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 BRD2P25440 801 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 SLC6A4P31645 630 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 CD70P32970 193 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 SLC11A2P49281 568 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 TBX4P57082 545 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 RPS14P62263 151 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 STIM1Q13586 685 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 HLA-BQ31612 363 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 CCDC40Q4G0X9 1142 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 FAM133BQ5BKY9 247 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 MPP7Q5T2T1 576 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 IL27RAQ6UWB1 636 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 RRAGAQ7L523 313 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 SLCO6A1Q86UG4 719 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 LMO3Q8TAP4 145 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 ADAMTS14Q8WXS8 1223 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 SNX19Q92543 992 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 AZIN2Q96A70 460 aa13.92□□□□□ -0.18
POLR2J3-219ENST00000608621 DHTKD1Q96HY7 919 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms