RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 RNF34Q969K3 372 aa14.81□□□□□ -0.04
HDDC2-206ENST00000608461 XPO4Q9C0E2 1151 aaKnown RBP14.81□□□□□ -0.04
HDDC2-206ENST00000608461 SEPT11Q9NVA2 429 aaKnown RBP14.81□□□□□ -0.04
HDDC2-206ENST00000608461 PLK2Q9NYY3 685 aa14.81□□□□□ -0.04
HDDC2-206ENST00000608461 LUC7L2Q9Y383 392 aaKnown RBP14.81□□□□□ -0.04
HDDC2-206ENST00000608461 LILRB5O75023 590 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 ENDOD1O94919 500 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 KRT3P12035 628 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 HNRNPLP14866 589 aaKnown RBP eCLIP14.8□□□□□ -0.04
HDDC2-206ENST00000608461 CXCR3P49682 368 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 DGKEP52429 567 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 MESP2Q0VG99 397 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 DMC1Q14565 340 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 C2orf27AQ580R0 203 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 NADSYN1Q6IA69 706 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 SDE2Q6IQ49 451 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 MON1BQ7L1V2 547 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 BNIPLQ7Z465 357 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 ANKS1BQ7Z6G8 1248 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 VPS36Q86VN1 386 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 LONP2Q86WA8 852 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 DRC7Q8IY82 874 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.8□□□□□ -0.04
HDDC2-206ENST00000608461 ZNF513Q8N8E2 541 aaPredicted RBP14.8□□□□□ -0.04
HDDC2-206ENST00000608461 IL17RCQ8NAC3 791 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 WFIKKN2Q8TEU8 576 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 UCMAQ8WVF2 138 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 C11orf70Q9BRQ4 267 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 HAUS4Q9H6D7 363 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 WDCPQ9H6R7 721 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 EBF1Q9UH73 591 aa14.8□□□□□ -0.04
HDDC2-206ENST00000608461 ANKRD62A6NC57 917 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 SIGLEC16A6NMB1 481 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 F5H5T6 163 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 GOLGA8SH3BPF8 625 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 CHRM1P11229 460 aaPredicted RBP14.79□□□□□ -0.04
HDDC2-206ENST00000608461 NTSR1P30989 418 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 SDC4P31431 198 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 SLC6A4P31645 630 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 FLT3P36888 993 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 PTPN9P43378 593 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 SULT1E1P49888 294 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 SEC13P55735 322 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 PITX1P78337 314 aaPredicted RBP14.79□□□□□ -0.04
HDDC2-206ENST00000608461 DEUP1Q05D60 604 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 NME3Q13232 169 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 CRY1Q16526 586 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 C2CD6Q53TS8 623 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 RABGAP1LQ5R372 815 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 SPECC1LQ69YQ0 1117 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 PKN3Q6P5Z2 889 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 KIAA0907Q7Z7F0 614 aaPredicted RBP14.79□□□□□ -0.04
HDDC2-206ENST00000608461 WDR5BQ86VZ2 330 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 MCOLN2Q8IZK6 566 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 FIBINQ8TAL6 211 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 BHMTQ93088 406 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 C1orf74Q96LT6 269 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 PPP1R9BQ96SB3 815 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 SELENOOQ9BVL4 669 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 PIGVQ9NUD9 493 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 ARHGEF38Q9NXL2 777 aa14.79□□□□□ -0.04
HDDC2-206ENST00000608461 C2CD4BA6NLJ0 364 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 PRRT4C9JH25 899 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 TRIM24O15164 1050 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 TSPAN3O60637 253 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 TBL1XO60907 577 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 ALDH1A2O94788 518 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 APBB3O95704 486 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 MOCS2O96007 188 aaPredicted RBP14.78□□□□□ -0.04
HDDC2-206ENST00000608461 GYPCP04921 128 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 SERPING1P05155 500 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 TPM1P09493 284 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 PDGFRAP16234 1089 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 DESP17661 470 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 TACR2P21452 398 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 HNRNPH3P31942 346 aaKnown RBP14.78□□□□□ -0.04
HDDC2-206ENST00000608461 RDXP35241 583 aaKnown RBP14.78□□□□□ -0.04
HDDC2-206ENST00000608461 TIE1P35590 1138 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 OXCT1P55809 520 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 SLC12A1Q13621 1099 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 RFWD3Q6PCD5 774 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 TSSK4Q6SA08 328 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 SARM1Q6SZW1 724 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 STRADAQ7RTN6 431 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 ZNF571Q7Z3V5 609 aaPredicted RBP14.78□□□□□ -0.04
HDDC2-206ENST00000608461 CHSY1Q86X52 802 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 AHI1Q8N157 1196 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 ALLCQ8N6M5 410 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 TXNDC5Q8NBS9 432 aaKnown RBP14.78□□□□□ -0.04
HDDC2-206ENST00000608461 RNF214Q8ND24 703 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 NKD2Q969F2 451 aaPredicted RBP14.78□□□□□ -0.04
HDDC2-206ENST00000608461 TRIM11Q96F44 468 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 P2RY11Q96G91 374 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 HAPLN3Q96S86 360 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 PRMT1Q99873 361 aaKnown RBP14.78□□□□□ -0.04
HDDC2-206ENST00000608461 ANP32EQ9BTT0 268 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 POLMQ9NP87 494 aaPredicted RBP14.78□□□□□ -0.04
HDDC2-206ENST00000608461 METTL5Q9NRN9 209 aaKnown RBP14.78□□□□□ -0.04
HDDC2-206ENST00000608461 ELOVL2Q9NXB9 296 aa14.78□□□□□ -0.04
HDDC2-206ENST00000608461 SYNJ2BP-COX16A0A087WUM0 186 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms