RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ZNF217O75362 1048 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 MOCS2O96007 188 aaPredicted RBP11.98□□□□□ -0.49
CCDC12-209ENST00000604164 MMEP08473 750 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 CHRM1P11229 460 aaPredicted RBP11.98□□□□□ -0.49
CCDC12-209ENST00000604164 OXCT1P55809 520 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 CDH18Q13634 790 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 FAM133BQ5BKY9 247 aaKnown RBP11.98□□□□□ -0.49
CCDC12-209ENST00000604164 ZC3H12AQ5D1E8 599 aaKnown RBP11.98□□□□□ -0.49
CCDC12-209ENST00000604164 RABGAP1LQ5R372 815 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 EGFLAMQ63HQ2 1017 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 PPP1R2P3Q6NXS1 205 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 TMEM92Q6UXU6 159 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 ARCQ7LC44 396 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 MFN1Q8IWA4 741 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 DHX40Q8IX18 779 aaKnown RBP11.98□□□□□ -0.49
CCDC12-209ENST00000604164 FAM160A2Q8N612 972 aaPredicted RBP11.98□□□□□ -0.49
CCDC12-209ENST00000604164 MDGA1Q8NFP4 955 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 ADAM32Q8TC27 787 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 HMGB4Q8WW32 186 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 PPP1R9BQ96SB3 815 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 CIPCQ9C0C6 399 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCDC12-209ENST00000604164 THAP10Q9P2Z0 257 aaPredicted RBP11.98□□□□□ -0.49
CCDC12-209ENST00000604164 PCDHGA5Q9Y5G8 931 aa11.98□□□□□ -0.49
CCDC12-209ENST00000604164 SYCE3A1L190 88 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 KCNU1A8MYU2 1149 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 PRR5-ARHGAP8B1AHC4 643 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 GOLGA6L19H0YKK7 550 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 GRAP2O75791 330 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 MOCS3O95396 460 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 SERPINC1P01008 464 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 PABPC1P11940 636 aaKnown RBP11.97□□□□□ -0.49
CCDC12-209ENST00000604164 ATP1A3P13637 1013 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 FERP16591 822 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 DPP6P42658 865 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 KLK7P49862 253 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 NOMO3P69849 1222 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 ARHGAP8P85298 464 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 LMNB2Q03252 620 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 SRSF5Q13243 272 aaKnown RBP11.97□□□□□ -0.49
CCDC12-209ENST00000604164 LPAL2Q16609 132 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 GEN1Q17RS7 908 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 MS4A13Q5J8X5 152 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 SPDYCQ5MJ68 293 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 BRMS1LQ5PSV4 323 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 FAM102AQ5T9C2 384 aaPredicted RBP11.97□□□□□ -0.49
CCDC12-209ENST00000604164 NAA35Q5VZE5 725 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 RNF43Q68DV7 783 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 RFWD3Q6PCD5 774 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 SLC36A4Q6YBV0 504 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 APTXQ7Z2E3 356 aaKnown RBP11.97□□□□□ -0.49
CCDC12-209ENST00000604164 CHSY1Q86X52 802 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 KIAA2013Q8IYS2 634 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCDC12-209ENST00000604164 FIBINQ8TAL6 211 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 HSD3B7Q9H2F3 369 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
CCDC12-209ENST00000604164 ABCB8Q9NUT2 735 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 POLR3BQ9NW08 1133 aaPredicted RBP11.97□□□□□ -0.49
CCDC12-209ENST00000604164 GGA2Q9UJY4 613 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 NOCTQ9UK39 431 aaKnown RBP11.97□□□□□ -0.49
CCDC12-209ENST00000604164 STON1Q9Y6Q2 735 aa11.97□□□□□ -0.49
CCDC12-209ENST00000604164 GOLGA6L7A0A1B0GV03 622 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 A0A1W2PQC6 194 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 M0QYT0 321 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 EPHB6O15197 1021 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 MAP3K13O43283 966 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 ASLP04424 464 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 CYP1A1P04798 512 aaPredicted RBP11.96□□□□□ -0.49
CCDC12-209ENST00000604164 POLR2EP19388 210 aaKnown RBP11.96□□□□□ -0.49
CCDC12-209ENST00000604164 TACR2P21452 398 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 HLA-FP30511 346 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 SLC6A4P31645 630 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 NSFP46459 744 aaKnown RBP11.96□□□□□ -0.49
CCDC12-209ENST00000604164 RNASE9P60153 205 aaKnown RBP11.96□□□□□ -0.49
CCDC12-209ENST00000604164 NME3Q13232 169 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 EIF4EBP2Q13542 120 aaPredicted RBP11.96□□□□□ -0.49
CCDC12-209ENST00000604164 SLC12A1Q13621 1099 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 ENPP2Q13822 863 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 TAF5Q15542 800 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 SLC25A52Q3SY17 297 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 PLK5Q496M5 336 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 NADSYN1Q6IA69 706 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 SERPINA13PQ6UXR4 307 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 CHST9Q7L1S5 443 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 LPCAT2Q7L5N7 544 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 KIAA0907Q7Z7F0 614 aaPredicted RBP11.96□□□□□ -0.49
CCDC12-209ENST00000604164 KBTBD6Q86V97 674 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 XYLT1Q86Y38 959 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 LGI2Q8N0V4 545 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 OLIG1Q8TAK6 271 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 CPA5Q8WXQ8 436 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 PGAP3Q96FM1 320 aaPredicted RBP11.96□□□□□ -0.49
CCDC12-209ENST00000604164 FUCA2Q9BTY2 467 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 TPSD1Q9BZJ3 242 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 NUCKS1Q9H1E3 243 aaKnown RBP11.96□□□□□ -0.49
CCDC12-209ENST00000604164 WDCPQ9H6R7 721 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 FBRSQ9HAH7 460 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 CACNA2D2Q9NY47 1150 aa11.96□□□□□ -0.49
CCDC12-209ENST00000604164 KIAA1522Q9P206 1035 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms