RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 IRAK2O43187 625 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 TIMM44O43615 452 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 EPHX1P07099 455 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 PABPC1P11940 636 aaKnown RBP17.01■□□□□ 0.31
TUBE1-206ENST00000603722 IRX4P78413 519 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 NNTQ13423 1086 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 E2F5Q15329 346 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 TAF5Q15542 800 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 FNDC3BQ53EP0 1204 aaKnown RBP17.01■□□□□ 0.31
TUBE1-206ENST00000603722 MIIPQ5JXC2 388 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 CHST9Q7L1S5 443 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 BEND5Q7L4P6 421 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 ADIPOR2Q86V24 386 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 AHI1Q8N157 1196 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.01■□□□□ 0.31
TUBE1-206ENST00000603722 AZIN2Q96A70 460 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 MYEOVQ96EZ4 313 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 SLC39A13Q96H72 371 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 TUBGCP2Q9BSJ2 902 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 NUCKS1Q9H1E3 243 aaKnown RBP17.01■□□□□ 0.31
TUBE1-206ENST00000603722 PRDM16Q9HAZ2 1276 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 POPDC2Q9HBU9 364 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 LMBRD1Q9NUN5 540 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 EVLQ9UI08 416 aaPredicted RBP17.01■□□□□ 0.31
TUBE1-206ENST00000603722 PILRBQ9UKJ0 227 aa17.01■□□□□ 0.31
TUBE1-206ENST00000603722 PES1O00541 588 aaKnown RBP17■□□□□ 0.31
TUBE1-206ENST00000603722 ADRB1P08588 477 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 HLA-EP13747 358 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 CD70P32970 193 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 DPP6P42658 865 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 COPAP53621 1224 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 PTK2Q05397 1052 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 ZNF33AQ06730 810 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 MPP7Q5T2T1 576 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 SLC41A1Q8IVJ1 513 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 MFN1Q8IWA4 741 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 WDTC1Q8N5D0 677 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 HJURPQ8NCD3 748 aaPredicted RBP17■□□□□ 0.31
TUBE1-206ENST00000603722 C1orf131Q8NDD1 294 aaKnown RBP17■□□□□ 0.31
TUBE1-206ENST00000603722 HSPA12BQ96MM6 686 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 CPXM1Q96SM3 734 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 DDX50Q9BQ39 737 aaKnown RBP17■□□□□ 0.31
TUBE1-206ENST00000603722 NUSAP1Q9BXS6 441 aaKnown RBP17■□□□□ 0.31
TUBE1-206ENST00000603722 TMEM9BQ9NQ34 198 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 XPO7Q9UIA9 1087 aaKnown RBP17■□□□□ 0.31
TUBE1-206ENST00000603722 PCDHGC3Q9UN70 934 aa17■□□□□ 0.31
TUBE1-206ENST00000603722 TYW5A2RUC4 315 aaKnown RBP16.99■□□□□ 0.31
TUBE1-206ENST00000603722 KCNJ18B7U540 433 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 FOXN3O00409 490 aaPredicted RBP16.99■□□□□ 0.31
TUBE1-206ENST00000603722 NDUFS2O75306 463 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 APOEP02649 317 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 CFIP05156 583 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 CD6P30203 668 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 HOXD12P35452 270 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 MAPK8P45983 427 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 RPS24P62847 133 aaKnown RBP16.99■□□□□ 0.31
TUBE1-206ENST00000603722 YWHAZP63104 245 aaKnown RBP16.99■□□□□ 0.31
TUBE1-206ENST00000603722 PITX1P78337 314 aaPredicted RBP16.99■□□□□ 0.31
TUBE1-206ENST00000603722 KCNJ12Q14500 433 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 ZC3H12AQ5D1E8 599 aaKnown RBP16.99■□□□□ 0.31
TUBE1-206ENST00000603722 DAB2IPQ5VWQ8 1189 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 PEAR1Q5VY43 1037 aaPredicted RBP16.99■□□□□ 0.31
TUBE1-206ENST00000603722 MBLAC2Q68D91 279 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 CLEC17AQ6ZS10 378 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 SLC47A2Q86VL8 602 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 TMPRSS6Q8IU80 811 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 ZNF366Q8N895 744 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 ZNF557Q8N988 423 aaPredicted RBP16.99■□□□□ 0.31
TUBE1-206ENST00000603722 PRCCQ92733 491 aaPredicted RBP16.99■□□□□ 0.31
TUBE1-206ENST00000603722 SIPA1Q96FS4 1042 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 PPP1R13BQ96KQ4 1090 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 LSM14BQ9BX40 385 aaKnown RBP16.99■□□□□ 0.31
TUBE1-206ENST00000603722 IRX2Q9BZI1 471 aaPredicted RBP16.99■□□□□ 0.31
TUBE1-206ENST00000603722 FAM204AQ9H8W3 233 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 FSCN3Q9NQT6 498 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 SAMSN1Q9NSI8 373 aaKnown RBP16.99■□□□□ 0.31
TUBE1-206ENST00000603722 USP36Q9P275 1121 aaKnown RBP16.99■□□□□ 0.31
TUBE1-206ENST00000603722 PLA2G4CQ9UP65 541 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 MYOFQ9NZM1 2061 aa16.99■□□□□ 0.31
TUBE1-206ENST00000603722 CDX4O14627 284 aaPredicted RBP16.98■□□□□ 0.31
TUBE1-206ENST00000603722 TRUB2O95900 331 aaKnown RBP16.98■□□□□ 0.31
TUBE1-206ENST00000603722 IGLV3-25P01717 112 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 ENGP17813 658 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 KRT9P35527 623 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 LMAN2Q12907 356 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 CDH18Q13634 790 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 RAPGEF1Q13905 1077 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 PTPRNQ16849 979 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 DCAF6Q58WW2 860 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 MS4A13Q5J8X5 152 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 RAP1GAP2Q684P5 730 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 FAM183BPQ6ZVS7 135 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 KIAA0907Q7Z7F0 614 aaPredicted RBP16.98■□□□□ 0.31
TUBE1-206ENST00000603722 METTL3Q86U44 580 aaKnown RBP16.98■□□□□ 0.31
TUBE1-206ENST00000603722 CHSY1Q86X52 802 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 CFAP52Q8N1V2 620 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 CARNMT1Q8N4J0 409 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 TOE1Q96GM8 510 aaKnown RBP16.98■□□□□ 0.31
TUBE1-206ENST00000603722 NOX5Q96PH1 765 aa16.98■□□□□ 0.31
TUBE1-206ENST00000603722 TMEM245Q9H330 911 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms