RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SGO2Q562F6 1265 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 KCTD16Q68DU8 428 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ACAD10Q6JQN1 1059 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 TUBA3EQ6PEY2 450 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ARHGAP36Q6ZRI8 547 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 MAP7D3Q8IWC1 876 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 SCML4Q8N228 414 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ADAMTS15Q8TE58 950 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 GATAD2BQ8WXI9 593 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 RFFLQ8WZ73 363 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 OSBP2Q969R2 916 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ARL5BQ96KC2 179 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 CCDC43Q96MW1 224 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 EHD4Q9H223 541 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 TMEM60Q9H2L4 133 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ADNPQ9H2P0 1102 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 TTYH1Q9H313 450 aaPredicted RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 COPS7BQ9H9Q2 264 aaPredicted RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ZMAT3Q9HA38 289 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 SARS2Q9NP81 518 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 SDHAF3Q9NRP4 125 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 FAIMQ9NVQ4 179 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 TRPS1Q9UHF7 1281 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 TUBD1Q9UJT1 453 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 DSEQ9UL01 958 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 STX8Q9UNK0 236 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 CAMK2AQ9UQM7 478 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 POLR3KQ9Y2Y1 108 aaPredicted RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 SNX9Q9Y5X1 595 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 BACE2Q9Y5Z0 518 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ITSN1Q15811 1721 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 KIF13BQ9NQT8 1826 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 PHRF1Q9P1Y6 1649 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 A0A1W2PNR3 127 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 K7ESF4 209 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 DNM1LO00429 736 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 GIPC1O14908 333 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 CUTAO60888 179 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 SEC24DO94855 1032 aaPredicted RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 GCNT3O95395 438 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 C22orf31O95567 290 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 PABPC1P11940 636 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ATP2A2P16615 1042 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 RXRAP19793 462 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 PDCP20941 246 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ATP6V1C1P21283 382 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 CHMP24386 653 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 PTBP1P26599 531 aaKnown RBP eCLIP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 HTR2BP41595 481 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 GPR3P46089 330 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 THOP1P52888 689 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 EPHB4P54760 987 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 NIPAL4Q0D2K0 466 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 SLC12A1Q13621 1099 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 GALNT3Q14435 633 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 PDCD1Q15116 288 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 PCSK7Q16549 785 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 CYP2A13Q16696 494 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ME3Q16798 604 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 PRR16Q569H4 304 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 TDRD10Q5VZ19 366 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 BORAQ6PGQ7 559 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 AGMOQ6ZNB7 445 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 C15orf52Q6ZUT6 534 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 GLRX5Q86SX6 157 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 DDX53Q86TM3 631 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 RNF152Q8N8N0 203 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 NOA1Q8NC60 698 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 AFG1LQ8WV93 481 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 MRPS27Q92552 414 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 PEX13Q92968 403 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 INTS12Q96CB8 462 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ABHD17AQ96GS6 310 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 THUMPD3Q9BV44 507 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ZNF518BQ9C0D4 1074 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 NUP62CLQ9H1M0 184 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 NOL6Q9H6R4 1146 aaKnown RBP5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 SUGCTQ9HAC7 445 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 PPP1R14DQ9NXH3 145 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ARHGEF38Q9NXL2 777 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 HSFX1Q9UBD0 423 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 PSME2Q9UL46 239 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 CLCA2Q9UQC9 943 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ZBTB1Q9Y2K1 713 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 NOX1Q9Y5S8 564 aa5.19□□□□□ -1.58
SPTBN1-206ENST00000602898 ZNF804BA4D1E1 1349 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 NPHP3Q7Z494 1330 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 TRAV34A0A0B4J273 112 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 METTL12A8MUP2 240 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 FAM47E-STBD1D6RA91 191 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 E9PMD0 336 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 GOLGA8MH3BSY2 632 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 KRT86O43790 486 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 DNAJA2O60884 412 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 RECQL4O94761 1208 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 HRGP04196 525 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ABCB1P08183 1280 aaPredicted RBP5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ACADMP11310 421 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 ACADSP16219 412 aa5.18□□□□□ -1.58
SPTBN1-206ENST00000602898 CD33P20138 364 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms