RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ARHGAP24Q8N264 748 aa20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 LRRC52Q8N7C0 313 aa20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 BEST2Q8NFU1 509 aa20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 SLC2A14Q8TDB8 520 aa20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 GCOM2Q9BZD3 368 aaPredicted RBP20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 CDHR5Q9HBB8 845 aa20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 ADARB2Q9NS39 739 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 STX18Q9P2W9 335 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 PLA2G4CQ9UP65 541 aa20.83■□□□□ 0.93
SHKBP1-225ENST00000600733 SDR42E2A6NKP2 422 aa20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 TOMM70O94826 608 aa20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 AKAP5P24588 427 aa20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 ARL4AP40617 200 aa20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 PITX1P78337 314 aaPredicted RBP20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 AP1B1Q10567 949 aa20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 PACS1Q6VY07 963 aa20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 KYAT3Q6YP21 454 aaKnown RBP20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 MARK2Q7KZI7 788 aaKnown RBP20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 ARNTL2Q8WYA1 636 aa20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 PGLYRP2Q96PD5 576 aa20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 XPNPEP3Q9NQH7 507 aa20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 MORF4L1Q9UBU8 362 aa20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 DERAQ9Y315 318 aa20.83■□□□□ 0.92
SHKBP1-225ENST00000600733 SYNJ2BP-COX16A0A087WUM0 186 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 SPECC1L-ADORA2AF8WAN1 911 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 RNF103O00237 685 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 SPTLC1O15269 473 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 MAGEC1O60732 1142 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 CNTFP26441 200 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 GMPRP36959 345 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 WASHC5Q12768 1159 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 SLC27A1Q6PCB7 646 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 CATSPER4Q7RTX7 472 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 THTPAQ9BU02 230 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 SETD4Q9NVD3 440 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 COX16Q9P0S2 106 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 SEPT10Q9P0V9 454 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 RALGAPA2Q2PPJ7 1873 aa20.82■□□□□ 0.92
SHKBP1-225ENST00000600733 DPPA5A6NC42 116 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 RECQL4O94761 1208 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 SERPINA6P08185 405 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 LINGO3P0C6S8 592 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 FGF3P11487 239 aaPredicted RBP20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 GNL1P36915 607 aaPredicted RBP20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 FDFT1P37268 417 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 TUBP50607 506 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 ZNF792Q3KQV3 632 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 CES3Q6UWW8 571 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 CYS1Q717R9 158 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 ZNF410Q86VK4 478 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 SCUBE1Q8IWY4 988 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 DEFB106AQ8N104 65 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 FAM149B1Q96BN6 582 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 FAM136AQ96C01 138 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 P2RY11Q96G91 374 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 FZD10Q9ULW2 581 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 DNAJC16Q9Y2G8 782 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 MEI4A8MW99 385 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 PSMB4P28070 264 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 SULT1E1P49888 294 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 CDK18Q07002 472 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 FBXO47Q5MNV8 452 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 TEDDM1Q5T9Z0 273 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 LRRC8BQ6P9F7 803 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 ATG14Q6ZNE5 492 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 ULK2Q8IYT8 1036 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 CFAP61Q8NHU2 1237 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 UCMAQ8WVF2 138 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 KLK14Q9P0G3 267 aa20.81■□□□□ 0.92
SHKBP1-225ENST00000600733 E2F8A0AVK6 867 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 MLNP12872 115 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 TKTP29401 623 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 KLC1Q07866 573 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 OLIG2Q13516 323 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 PPM1JQ5JR12 505 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 FASTKD5Q7L8L6 764 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 STRADAQ7RTN6 431 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 TP53INP2Q8IXH6 220 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 PIWIL2Q8TC59 973 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 PANX3Q96QZ0 392 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 OSMRQ99650 979 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 ADAMTS10Q9H324 1103 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 VTA1Q9NP79 307 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 SYBUQ9NX95 663 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 HACD1B0YJ81 288 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 PLIN3O60664 434 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 TM7SF2O76062 418 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 MATKP42679 507 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 SLC1A6P48664 564 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 RPL34P49207 117 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 MXRA7P84157 204 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 PCLAFQ15004 111 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 DCAF6Q58WW2 860 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 RIPOR1Q6ZS17 1223 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 CRYBG2Q8N1P7 616 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 CCNYQ8ND76 341 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 CDKL2Q92772 493 aa20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 EMID1Q96A84 441 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-225ENST00000600733 GOLGA2P5Q9HBQ8 144 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms