RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ETNK2Q9NVF9 386 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 MTRF1LQ9UGC7 380 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 SLC12A6Q9UHW9 1150 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 INSL5Q9Y5Q6 135 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 IRAK3Q9Y616 596 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 NDC80O14777 642 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 TLR5O60602 858 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 PAGE1O75459 146 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 SASH3O75995 380 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 TBX18O95935 607 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 IFNB1P01574 187 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 ERCC2P18074 760 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 PPP3CCP48454 512 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 UBE3AQ05086 875 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 TWF1Q12792 350 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 SLC10A2Q12908 348 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 CDKL3Q8IVW4 592 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 C1orf74Q96LT6 269 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 KLHL5Q96PQ7 755 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 EMILIN2Q9BXX0 1053 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 C10orf88Q9H8K7 445 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 DTLQ9NZJ0 730 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 TRPM5Q9NZQ8 1165 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 ANAPC5Q9UJX4 755 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 RAD54BQ9Y620 910 aa18.24■□□□□ 0.51
SHKBP1-224ENST00000600718 GREB1Q4ZG55 1949 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 ZNF840PA6NDX5 716 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 HACD1B0YJ81 288 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 LRIG2O94898 1065 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 ADH1AP07327 375 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 ZSCAN5DPP0CG00 497 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 ETS1P14921 441 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 VPS41P49754 854 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 NRG1Q02297 640 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 LILRA6Q6PI73 481 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 FAM71DQ8N9W8 422 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 GLIS1Q8NBF1 620 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 SPPL3Q8TCT6 385 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 TCF25Q9BQ70 676 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 SIK2Q9H0K1 926 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 USP29Q9HBJ7 922 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 ALG13Q9NP73 1137 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 UXTQ9UBK9 157 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 SNX10Q9Y5X0 201 aa18.23■□□□□ 0.51
SHKBP1-224ENST00000600718 C5orf67F2Z3F1 127 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 TGM5O43548 720 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 APOEP02649 317 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 RB1P06400 928 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 ATP5C1P36542 298 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 MLLT6P55198 1093 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 ERVFC1P60507 584 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 RING1Q06587 406 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 GPS1Q13098 491 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 MTA1Q13330 715 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 SLC45A4Q5BKX6 768 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 HECTD3Q5T447 861 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 ACBD5Q5T8D3 534 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 IZUMO3Q5VZ72 239 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 KLHDC10Q6PID8 442 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 DNAJB7Q7Z6W7 309 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 PRUNE1Q86TP1 453 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 ITIH5Q86UX2 942 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 ATP6V0D2Q8N8Y2 350 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 CCSER2Q9H7U1 834 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 ENTPD7Q9NQZ7 604 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 DNMT3LQ9UJW3 386 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 ASB3Q9Y575 518 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 SLC12A8A0AV02 714 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 EPHB2P29323 1055 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 HSPA9P38646 679 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 ITGA8P53708 1063 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 GDF10P55107 478 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 P3H1Q32P28 736 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 RHBDF2Q6PJF5 856 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 CCDC149Q6ZUS6 474 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 MIB1Q86YT6 1006 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 MRPL43Q8N983 215 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 PSMG2Q969U7 264 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 RTP4Q96DX8 246 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 OLFM3Q96PB7 478 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 TSPYL1Q9H0U9 437 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 HBS1LQ9Y450 684 aaKnown RBP18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 MFHAS1Q9Y4C4 1052 aa18.22■□□□□ 0.51
SHKBP1-224ENST00000600718 DNALI1O14645 258 aaPredicted RBP18.21■□□□□ 0.51
SHKBP1-224ENST00000600718 TP73O15350 636 aa18.21■□□□□ 0.51
SHKBP1-224ENST00000600718 IGLV3-27P01718 113 aa18.21■□□□□ 0.51
SHKBP1-224ENST00000600718 RBL1P28749 1068 aa18.21■□□□□ 0.51
SHKBP1-224ENST00000600718 RPL22P35268 128 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-224ENST00000600718 PDK1Q15118 436 aa18.21■□□□□ 0.51
SHKBP1-224ENST00000600718 PCGF5Q86SE9 256 aa18.21■□□□□ 0.51
SHKBP1-224ENST00000600718 POF1BQ8WVV4 589 aa18.21■□□□□ 0.51
SHKBP1-224ENST00000600718 QKIQ96PU8 341 aaKnown RBP eCLIP18.21■□□□□ 0.51
SHKBP1-224ENST00000600718 ACBD3Q9H3P7 528 aa18.21■□□□□ 0.51
SHKBP1-224ENST00000600718 TPX2Q9ULW0 747 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-224ENST00000600718 HPCAL4Q9UM19 191 aa18.21■□□□□ 0.51
SHKBP1-224ENST00000600718 NR2E3Q9Y5X4 410 aa18.21■□□□□ 0.51
SHKBP1-224ENST00000600718 KCNN4O15554 427 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 MFSD11O43934 449 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 ZNF189O75820 626 aaPredicted RBP18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms