RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 PYROXD2Q8N2H3 581 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 C1orf74Q96LT6 269 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 TMEM109Q9BVC6 243 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 ADAM7Q9H2U9 754 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.71■□□□□ 0.91
PNKP-214ENST00000600573 GMIPQ9P107 970 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 OR12D3Q9UGF7 316 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 SLC12A6Q9UHW9 1150 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 MYO16Q9Y6X6 1858 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 CREB3O43889 395 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 CSH1P0DML2 217 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 CSH2P0DML3 217 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 ETS1P14921 441 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 AMPD1P23109 780 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 PPP3CCP48454 512 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 LMAN1P49257 510 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 TAF10Q12962 218 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 SLC29A2Q14542 456 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 PDK1Q15118 436 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 RNASEH2BQ5TBB1 312 aaKnown RBP20.71■□□□□ 0.91
PNKP-214ENST00000600573 SDHAF4Q5VUM1 108 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 KCTD16Q68DU8 428 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 NPNTQ6UXI9 565 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 VPS52Q8N1B4 723 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 SH2D3CQ8N5H7 860 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 HERVK_113Q902F9 699 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 CLP1Q92989 425 aaKnown RBP20.71■□□□□ 0.91
PNKP-214ENST00000600573 RAD9AQ99638 391 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 ZBED2Q9BTP6 218 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 PHACTR1Q9C0D0 580 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 CENPHQ9H3R5 247 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 PAK5Q9P286 719 aa20.71■□□□□ 0.91
PNKP-214ENST00000600573 ALDH1A3P47895 512 aa20.7■□□□□ 0.9
PNKP-214ENST00000600573 USP46P62068 366 aa20.7■□□□□ 0.9
PNKP-214ENST00000600573 SLC45A4Q5BKX6 768 aa20.7■□□□□ 0.9
PNKP-214ENST00000600573 TMEM240Q5SV17 173 aa20.7■□□□□ 0.9
PNKP-214ENST00000600573 SNX30Q5VWJ9 437 aa20.7■□□□□ 0.9
PNKP-214ENST00000600573 KDM7AQ6ZMT4 941 aa20.7■□□□□ 0.9
PNKP-214ENST00000600573 ZC3H18Q86VM9 953 aaKnown RBP20.7■□□□□ 0.9
PNKP-214ENST00000600573 UNC45BQ8IWX7 931 aa20.7■□□□□ 0.9
PNKP-214ENST00000600573 TTC9BQ8N6N2 239 aa20.7■□□□□ 0.9
PNKP-214ENST00000600573 CASP10Q92851 521 aa20.7■□□□□ 0.9
PNKP-214ENST00000600573 CRISPLD1Q9H336 500 aa20.7■□□□□ 0.9
PNKP-214ENST00000600573 USP29Q9HBJ7 922 aa20.7■□□□□ 0.9
PNKP-214ENST00000600573 RXFP1Q9HBX9 757 aa20.7■□□□□ 0.9
PNKP-214ENST00000600573 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.7■□□□□ 0.9
PNKP-214ENST00000600573 DONSONQ9NYP3 566 aa20.7■□□□□ 0.9
PNKP-214ENST00000600573 KIAA0100Q14667 2235 aaKnown RBP20.69■□□□□ 0.9
PNKP-214ENST00000600573 KCNU1A8MYU2 1149 aa20.69■□□□□ 0.9
PNKP-214ENST00000600573 C2CD2LO14523 706 aa20.69■□□□□ 0.9
PNKP-214ENST00000600573 PPP1R12AO14974 1030 aaPredicted RBP20.69■□□□□ 0.9
PNKP-214ENST00000600573 DCLK1O15075 740 aa20.69■□□□□ 0.9
PNKP-214ENST00000600573 ADAM12O43184 909 aa20.69■□□□□ 0.9
PNKP-214ENST00000600573 SHBGP04278 402 aa20.69■□□□□ 0.9
PNKP-214ENST00000600573 NR1D1P20393 614 aa20.69■□□□□ 0.9
PNKP-214ENST00000600573 ELF1P32519 619 aa20.69■□□□□ 0.9
PNKP-214ENST00000600573 SERPINB6P35237 376 aa20.69■□□□□ 0.9
PNKP-214ENST00000600573 GDF10P55107 478 aa20.69■□□□□ 0.9
PNKP-214ENST00000600573 SKOR1P84550 965 aa20.69■□□□□ 0.9
PNKP-214ENST00000600573 TMCO2Q7Z6W1 182 aaPredicted RBP20.69■□□□□ 0.9
PNKP-214ENST00000600573 FAM71DQ8N9W8 422 aa20.69■□□□□ 0.9
PNKP-214ENST00000600573 DTLQ9NZJ0 730 aa20.69■□□□□ 0.9
PNKP-214ENST00000600573 RWDD3Q9Y3V2 267 aa20.69■□□□□ 0.9
PNKP-214ENST00000600573 FGF10O15520 208 aaPredicted RBP20.68■□□□□ 0.9
PNKP-214ENST00000600573 TTC4O95801 387 aa20.68■□□□□ 0.9
PNKP-214ENST00000600573 MX2P20592 715 aa20.68■□□□□ 0.9
PNKP-214ENST00000600573 RPL22P35268 128 aaKnown RBP20.68■□□□□ 0.9
PNKP-214ENST00000600573 VEPH1Q14D04 833 aa20.68■□□□□ 0.9
PNKP-214ENST00000600573 PPIL6Q8IXY8 311 aa20.68■□□□□ 0.9
PNKP-214ENST00000600573 ARFGAP2Q8N6H7 521 aa20.68■□□□□ 0.9
PNKP-214ENST00000600573 SP7Q8TDD2 431 aaPredicted RBP20.68■□□□□ 0.9
PNKP-214ENST00000600573 TFB1MQ8WVM0 346 aaKnown RBP20.68■□□□□ 0.9
PNKP-214ENST00000600573 SLC39A13Q96H72 371 aa20.68■□□□□ 0.9
PNKP-214ENST00000600573 MYRFLQ96LU7 910 aa20.68■□□□□ 0.9
PNKP-214ENST00000600573 OLFM3Q96PB7 478 aa20.68■□□□□ 0.9
PNKP-214ENST00000600573 QKIQ96PU8 341 aaKnown RBP eCLIP20.68■□□□□ 0.9
PNKP-214ENST00000600573 HTATIP2Q9BUP3 242 aa20.68■□□□□ 0.9
PNKP-214ENST00000600573 OSER1Q9NX31 292 aa20.68■□□□□ 0.9
PNKP-214ENST00000600573 NINJ2Q9NZG7 142 aa20.68■□□□□ 0.9
PNKP-214ENST00000600573 SFMBT1Q9UHJ3 866 aa20.68■□□□□ 0.9
PNKP-214ENST00000600573 SLC4A7Q9Y6M7 1214 aa20.68■□□□□ 0.9
PNKP-214ENST00000600573 FGF18O76093 207 aa20.67■□□□□ 0.9
PNKP-214ENST00000600573 STK10O94804 968 aaKnown RBP20.67■□□□□ 0.9
PNKP-214ENST00000600573 CTSAP10619 480 aa20.67■□□□□ 0.9
PNKP-214ENST00000600573 ERCC2P18074 760 aa20.67■□□□□ 0.9
PNKP-214ENST00000600573 RPL17P18621 184 aaKnown RBP20.67■□□□□ 0.9
PNKP-214ENST00000600573 ATF6P18850 670 aa20.67■□□□□ 0.9
PNKP-214ENST00000600573 TBX4P57082 545 aa20.67■□□□□ 0.9
PNKP-214ENST00000600573 GBE1Q04446 702 aa20.67■□□□□ 0.9
PNKP-214ENST00000600573 RING1Q06587 406 aa20.67■□□□□ 0.9
PNKP-214ENST00000600573 PLD1Q13393 1074 aa20.67■□□□□ 0.9
PNKP-214ENST00000600573 TRIP4Q15650 581 aaPredicted RBP20.67■□□□□ 0.9
PNKP-214ENST00000600573 KLHDC10Q6PID8 442 aa20.67■□□□□ 0.9
PNKP-214ENST00000600573 ZNF771Q7L3S4 317 aaPredicted RBP20.67■□□□□ 0.9
PNKP-214ENST00000600573 TCEAL8Q8IYN2 117 aa20.67■□□□□ 0.9
PNKP-214ENST00000600573 LZTR1Q8N653 840 aa20.67■□□□□ 0.9
PNKP-214ENST00000600573 ATP6V0D2Q8N8Y2 350 aa20.67■□□□□ 0.9
PNKP-214ENST00000600573 PRCCQ92733 491 aaPredicted RBP20.67■□□□□ 0.9
PNKP-214ENST00000600573 TRMT2BQ96GJ1 504 aaKnown RBP20.67■□□□□ 0.9
PNKP-214ENST00000600573 FRMD8Q9BZ67 464 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms